ENSDARG00000004864


Danio rerio

Features
Gene ID: ENSDARG00000004864
  
Biological name :zgc:171734
  
Synonyms : zgc:171734
  
Possible biological names infered from orthology : Forkhead box protein R1 / Forkhead box protein R2 / forkhead box R1 / forkhead box R2 / FOXR1 / FOXR2 / Q3UM89 / Q3UTB7 / Q6PIV2 / Q6PJQ5
  
Species: Danio rerio
  
Chr. number: 5
Strand: 1
Band:
Gene start: 58679071
Gene end: 58684455
  
Corresponding Affymetrix probe sets:
  
Cross references: Ensembl peptide - ENSDARP00000013603
NCBI entrez gene - 570997     See in Manteia.
RefSeq - NM_001103124
RefSeq Peptide - NP_001096594
swissprot - A7MBX0
ZFIN ID - ZDB-GENE-070928-26
Ensembl - ENSDARG00000004864
  
See expression report in BioGPS
See gene description in Wikigenes
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 FOXR1ENSG00000176302Homo sapiens
 FOXR2ENSG00000189299Homo sapiens
 Foxr1ENSMUSG00000074397Mus musculus
 Foxr2ENSMUSG00000071665Mus musculus


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
No match


Protein motifs (from Interpro)
Interpro ID Name
 IPR001766  Fork head domain
 IPR011991  ArsR-like helix-turn-helix domain


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0006351 transcription, DNA-templated IEA
 biological_processGO:0006355 regulation of transcription, DNA-templated IEA
 biological_processGO:0006357 regulation of transcription by RNA polymerase II IEA
 biological_processGO:0009653 anatomical structure morphogenesis IBA
 biological_processGO:0030154 cell differentiation IBA
 cellular_componentGO:0005634 nucleus IEA
 molecular_functionGO:0000981 RNA polymerase II transcription factor activity, sequence-specific DNA binding IBA
 molecular_functionGO:0003677 DNA binding IEA
 molecular_functionGO:0003700 DNA-binding transcription factor activity IEA
 molecular_functionGO:0043565 sequence-specific DNA binding IEA


Pathways (from Reactome)
Pathway description
No match


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
No match
  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

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