ENSDARG00000004866


Danio rerio

Features
Gene ID: ENSDARG00000004866
  
Biological name :mindy1
  
Synonyms : A3KQS4 / mindy1 / MINDY lysine 48 deubiquitinase 1
  
Possible biological names infered from orthology : Q76LS9 / Q8N5J2 / Ubiquitin carboxyl-terminal hydrolase MINDY-1
  
Species: Danio rerio
  
Chr. number: 19
Strand: 1
Band:
Gene start: 7453996
Gene end: 7478597
  
Corresponding Affymetrix probe sets: Dr.13812.1.A1_at (Zebrafish Array)   Dr.14170.1.S1_at (Zebrafish Array)   
  
Cross references: Ensembl peptide - ENSDARP00000117536
Ensembl peptide - ENSDARP00000116319
NCBI entrez gene - 563470     See in Manteia.
RefSeq - NM_001100011
RefSeq - XM_005159451
RefSeq Peptide - NP_001093481
swissprot - A3KQS4
ZFIN ID - ZDB-GENE-070717-2
Ensembl - ENSDARG00000004866
  
See expression report in BioGPS
See gene description in Wikigenes
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 MINDY1ENSGALG00000028499Gallus gallus
 MINDY1ENSG00000143409Homo sapiens
 Mindy1ENSMUSG00000038712Mus musculus


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
mindy2 / MINDY lysine 48 deubiquitinase 2 / Q6PDI6* / Q8NBR6* / Ubiquitin carboxyl-terminal hydrolase MINDY-2 *ENSDARG0000001743146


Protein motifs (from Interpro)
Interpro ID Name
 IPR007518  MINDY deubiquitinase
 IPR033979  MINDY deubiquitinase domain


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0006508 proteolysis IEA
 biological_processGO:0071108 protein K48-linked deubiquitination IEA
 molecular_functionGO:0004843 thiol-dependent ubiquitin-specific protease activity IEA
 molecular_functionGO:0008233 peptidase activity IEA
 molecular_functionGO:0008234 cysteine-type peptidase activity IEA
 molecular_functionGO:0016787 hydrolase activity IEA
 molecular_functionGO:0036435 K48-linked polyubiquitin modification-dependent protein binding ISS
 molecular_functionGO:0036459 thiol-dependent ubiquitinyl hydrolase activity IEA
 molecular_functionGO:1990380 Lys48-specific deubiquitinase activity IEA


Pathways (from Reactome)
Pathway description
No match


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
No match
  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

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