ENSDARG00000004880


Danio rerio

Features
Gene ID: ENSDARG00000004880
  
Biological name :acsm3
  
Synonyms : acsm3 / acyl-CoA synthetase medium chain family member 3
  
Possible biological names infered from orthology : Acyl-coenzyme A synthetase ACSM3, mitochondrial / Q3UNX5 / Q53FZ2
  
Species: Danio rerio
  
Chr. number: 2
Strand: -1
Band:
Gene start: 44725550
Gene end: 44746723
  
Corresponding Affymetrix probe sets:
  
Cross references: Ensembl peptide - ENSDARP00000041805
NCBI entrez gene - 100002035     See in Manteia.
RefSeq - NM_001111236
RefSeq Peptide - NP_001104706
swissprot - A9JRA7
ZFIN ID - ZDB-GENE-080220-22
Ensembl - ENSDARG00000004880
  
See expression report in BioGPS
See gene description in Wikigenes
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 ACSM3ENSGALG00000002200Gallus gallus
 ACSM3ENSG00000005187Homo sapiens
 Acsm3ENSMUSG00000030935Mus musculus


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
acss1 / acyl-CoA synthetase short chain family member 1 / Q99NB1* / Q9NUB1* / Acetyl-coenzyme A synthetase 2-like, mitochondrial *ENSDARG0000004414227
acss2l / acyl-CoA synthetase short chain family member 2 likeENSDARG0000006902925
acss3 / acyl-CoA synthetase short chain family member 3 / Q14DH7* / Q9H6R3* / Acyl-CoA synthetase short-chain family member 3, mitochondrial *ENSDARG0000003221824
acss2 / acyl-CoA synthetase short chain family member 2 / Q9NR19* / Q9QXG4* / Acetyl-coenzyme A synthetase, cytoplasmic *ENSDARG0000003778120


Protein motifs (from Interpro)
Interpro ID Name
 IPR000873  AMP-dependent synthetase/ligase
 IPR020845  AMP-binding, conserved site
 IPR025110  AMP-binding enzyme, C-terminal domain


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0006633 fatty acid biosynthetic process IBA
 biological_processGO:0006637 acyl-CoA metabolic process IBA
 biological_processGO:0008152 metabolic process IEA
 cellular_componentGO:0005759 mitochondrial matrix IBA
 molecular_functionGO:0003824 catalytic activity IEA
 molecular_functionGO:0003996 acyl-CoA ligase activity IBA
 molecular_functionGO:0004321 fatty-acyl-CoA synthase activity IBA
 molecular_functionGO:0015645 fatty acid ligase activity IBA


Pathways (from Reactome)
Pathway description
No match


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
No match
  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

0 s.

 
External programs and data are copyrighted by and are the property of their respective authors.
The Manteia system, data and analyses are provided "as is" with no warranties, expressed or implied as to capabilities or accuracy. User assumes the entire risk as to the results and performance of the software, data and documentation


                   

© Olivier Tassy / Olivier Pourquie 2007-2025
contact: otassy@igbmc.fr