ENSDARG00000005463


Danio rerio

Features
Gene ID: ENSDARG00000005463
  
Biological name :slc30a1a
  
Synonyms : slc30a1a / solute carrier family 30 (zinc transporter), member 1a
  
Possible biological names infered from orthology : Q60738 / Q9Y6M5 / SLC30A1 / solute carrier family 30 member 1 / solute carrier family 30 (zinc transporter), member 1
  
Species: Danio rerio
  
Chr. number: 20
Strand: 1
Band:
Gene start: 13894123
Gene end: 13913790
  
Corresponding Affymetrix probe sets: Dr.12303.1.A1_at (Zebrafish Array)   NM_200879_at (Zebrafish Genome Array with custom cdf files)   
  
Cross references: Ensembl peptide - ENSDARP00000022487
NCBI entrez gene - 393853     See in Manteia.
RefSeq - XM_005160431
RefSeq - NM_200879
RefSeq Peptide - NP_957173
swissprot - Q6P3M0
ZFIN ID - ZDB-GENE-040426-1840
Ensembl - ENSDARG00000005463
  
See expression report in BioGPS
See gene description in Wikigenes
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 SLC30A1ENSGALG00000009858Gallus gallus
 Q9Y6M5ENSG00000170385Homo sapiens
 Q60738ENSMUSG00000037434Mus musculus


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
slc30a1b / solute carrier family 30 (zinc transporter), member 1b / Q9Y6M5* / Q60738* / SLC30A1* / solute carrier family 30 member 1* / solute carrier family 30 (zinc transporter), member 1*ENSDARG0000005389658
slc30a10 / solute carrier family 30, member 10 / Q6XR72*ENSDARG0000010398327
FO681288.1ENSDARG0000005458421
slc30a2 / solute carrier family 30 (zinc transporter), member 2 / P97441* / Q99726* / SLC30A3* / solute carrier family 30 member 3* / Mus musculus solute carrier family 30 (zinc transporter...ENSDARG0000002130518
slc30a8 / solute carrier family 30 (zinc transporter), member 8 / Q8IWU4* / Q8BGG0* / Zinc transporter 8 * / solute carrier family 30 member 8*ENSDARG0000010091717
slc30a4 / solute carrier family 30 (zinc transporter), member 4 / O35149* / O14863* / Zinc transporter 4 * / solute carrier family 30 member 4*ENSDARG0000000718014


Protein motifs (from Interpro)
Interpro ID Name
 IPR002524  Cation efflux protein
 IPR027470  Cation efflux protein, cytoplasmic domain


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0006812 cation transport IEA
 biological_processGO:0006829 zinc ion transport ISS
 biological_processGO:0010043 response to zinc ion IDA
 biological_processGO:0055085 transmembrane transport IEA
 biological_processGO:0061088 regulation of sequestering of zinc ion IBA
 biological_processGO:0065009 regulation of molecular function IEA
 biological_processGO:0071577 zinc ion transmembrane transport IEA
 biological_processGO:0098655 cation transmembrane transport IEA
 cellular_componentGO:0005783 endoplasmic reticulum IBA
 cellular_componentGO:0005794 Golgi apparatus IBA
 cellular_componentGO:0005886 plasma membrane IBA
 cellular_componentGO:0016020 membrane IEA
 cellular_componentGO:0016021 integral component of membrane IEA
 molecular_functionGO:0005385 zinc ion transmembrane transporter activity ISS
 molecular_functionGO:0008324 cation transmembrane transporter activity IEA
 molecular_functionGO:0019855 calcium channel inhibitor activity IBA


Pathways (from Reactome)
Pathway description
Zinc efflux and compartmentalization by the SLC30 family


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
No match
  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

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