ENSDARG00000005476


Danio rerio

Features
Gene ID: ENSDARG00000005476
  
Biological name :nav3
  
Synonyms : nav3 / neuron navigator 3 / Q5TZ18
  
Possible biological names infered from orthology : Q8IVL0
  
Species: Danio rerio
  
Chr. number: 4
Strand: 1
Band:
Gene start: 20812900
Gene end: 20987564
  
Corresponding Affymetrix probe sets: Dr.19886.1.A1_a_at (Zebrafish Array)   Dr.21811.1.S1_at (Zebrafish Array)   
  
Cross references: Ensembl peptide - ENSDARP00000021413
Ensembl peptide - ENSDARP00000028470
Ensembl peptide - ENSDARP00000114635
NCBI entrez gene - 567779     See in Manteia.
swissprot - Q5RHH6
swissprot - Q5RHH7
swissprot - Q5TZ18
ZFIN ID - ZDB-GENE-021205-1
Ensembl - ENSDARG00000005476
  
See expression report in BioGPS
See gene description in Wikigenes
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 NAV3ENSGALG00000010311Gallus gallus
 NAV3ENSG00000067798Homo sapiens
 Nav3ENSMUSG00000020181Mus musculus


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
nav2a / neuron navigator 2a / NAV2* / Q8IVL1* / neuron navigator 2*ENSDARG0000007368849
nav2b / neuron navigator 2b / NAV2* / Q8IVL1* / neuron navigator 2*ENSDARG0000000187944
nav1b / neuron navigator 1b / NAV1* / Q8NEY1* / Q8CH77* / neuron navigator 1*ENSDARG0000005877129
NAV1 (1 of many) / neuron navigator 1 / NAV1* / Q8NEY1*ENSDARG0000007801126
cttnbp2 / cortactin binding protein 2 / B9EJA2* / Q8WZ74*ENSDARG0000004099110
cttnbp2nlb / CTTNBP2 N-terminal like b / Q9P2B4* / Q99LJ0* / CTTNBP2NL* / CTTNBP2 N-terminal like* / CTTNBP2 N-terminal-like protein *ENSDARG000000560914
cttnbp2nla / CTTNBP2 N-terminal like a / Q9P2B4* / CTTNBP2NL* / CTTNBP2 N-terminal like*ENSDARG000000531793


Protein motifs (from Interpro)
Interpro ID Name
 IPR001715  Calponin homology domain
 IPR003593  AAA+ ATPase domain
 IPR003959  ATPase, AAA-type, core
 IPR027417  P-loop containing nucleoside triphosphate hydrolase


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0031016 pancreas development IMP
 biological_processGO:0072576 liver morphogenesis IMP
 cellular_componentGO:0005634 nucleus IEA
 cellular_componentGO:0005640 nuclear outer membrane IEA
 cellular_componentGO:0005794 Golgi apparatus IDA
 cellular_componentGO:0016020 membrane IEA
 cellular_componentGO:0030027 lamellipodium IDA
 cellular_componentGO:0030175 filopodium IDA
 molecular_functionGO:0003779 actin binding IDA
 molecular_functionGO:0005524 ATP binding IEA


Pathways (from Reactome)
Pathway description
No match


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
 ZFA:0000123 liver liver decreased size , abnormal
liver aplastic , abnormal
liver shape , abnormal
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 ZFA:0000124 liver primordium liver primordium decreased size , abnormal
Show

  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

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