ENSDARG00000005675


Danio rerio

Features
Gene ID: ENSDARG00000005675
  
Biological name :sec61a1l
  
Synonyms : sec61a1l / Sec61 translocon alpha 1 subunit, like
  
Possible biological names infered from orthology : P61619 / P61620 / Protein transport protein Sec61 subunit alpha isoform 1 / SEC61A1 / Sec61 translocon alpha 1 subunit
  
Species: Danio rerio
  
Chr. number: 6
Strand: -1
Band:
Gene start: 42377911
Gene end: 42388608
  
Corresponding Affymetrix probe sets: Dr.256.1.S1_at (Zebrafish Array)   NM_201577_at (Zebrafish Genome Array with custom cdf files)   
  
Cross references: Ensembl peptide - ENSDARP00000049424
NCBI entrez gene - 266796     See in Manteia.
RefSeq - NM_201577
RefSeq Peptide - NP_963871
swissprot - A0A0J9YIG5
ZFIN ID - ZDB-GENE-021016-2
Ensembl - ENSDARG00000005675
  
See expression report in BioGPS
See gene description in Wikigenes
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 SEC61A1ENSGALG00000005966Gallus gallus
 P61619ENSG00000058262Homo sapiens
 P61620ENSMUSG00000030082Mus musculus


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
Q90ZM2 / sec61a1 / Sec61 translocon alpha 1 subunit / P61619* / P61620* / Protein transport protein Sec61 subunit alpha isoform 1 *ENSDARG0000002166998


Protein motifs (from Interpro)
Interpro ID Name
 IPR002208  SecY/SEC61-alpha family
 IPR019561  Translocon Sec61/SecY, plug domain
 IPR023201  SecY domain superfamily
 IPR030659  SecY conserved site


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0015031 protein transport IEA
 cellular_componentGO:0016020 membrane IEA
 cellular_componentGO:0016021 integral component of membrane IEA


Pathways (from Reactome)
Pathway description
XBP1(S) activates chaperone genes


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
 ZFA:0001558 pronephric tubule pronephric tubule shape , abnormal
pronephric tubule atrophied , abnormal
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Interacting proteins (from Reactome)
Interactor ID Name Interaction type
 ENSDARG00000018190 asna1 / Q6IQE5 / arsA arsenite transporter, ATP-binding, homolog 1 (bacterial) / O43681* / O54984* / ATPase Asna1 *  / reaction
 ENSDARG00000018637 sec61g / Sec61 translocon gamma subunit / P60059* / P60060* / Protein transport protein Sec61 subunit gamma *  / complex
 ENSDARG00000076568 sec61b / Sec61 translocon beta subunit / P60468* / Q9CQS8* / Gm10320* / Protein transport protein Sec61 subunit beta *  / complex






 

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