ENSDARG00000006174


Danio rerio

Features
Gene ID: ENSDARG00000006174
  
Biological name :lrrc23
  
Synonyms : leucine rich repeat containing 23 / lrrc23
  
Possible biological names infered from orthology : Leucine-rich repeat-containing protein 23 / O35125 / Q53EV4
  
Species: Danio rerio
  
Chr. number: 23
Strand: -1
Band:
Gene start: 20127883
Gene end: 20133994
  
Corresponding Affymetrix probe sets: Dr.26041.1.A1_at (Zebrafish Array)   NM_001006054_at (Zebrafish Genome Array with custom cdf files)   
  
Cross references: Ensembl peptide - ENSDARP00000004624
NCBI entrez gene - 450033     See in Manteia.
RefSeq - NM_001006054
RefSeq Peptide - NP_001006054
swissprot - B7ZDB1
ZFIN ID - ZDB-GENE-041010-153
Ensembl - ENSDARG00000006174
  
See expression report in BioGPS
See gene description in Wikigenes
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 LRRC23ENSGALG00000043468Gallus gallus
 LRRC23ENSG00000010626Homo sapiens
 Lrrc23ENSMUSG00000030125Mus musculus


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
ppp1r7 / Q32PL1 / protein phosphatase 1, regulatory (inhibitor) subunit 7 / Q3UM45* / Q15435* / protein phosphatase 1 regulatory subunit 7*ENSDARG0000000974021
drc3 / dynein regulatory complex subunit 3 / Q9H069*ENSDARG0000004130012
lrguk / leucine-rich repeats and guanylate kinase domain containing / Q96M69* / Q9D5S7* / Leucine-rich repeat and guanylate kinase domain-containing protein *ENSDARG0000006969812
dnaaf1 / dynein, axonemal, assembly factor 1 / Q8NEP3* / Q9D2H9* / Dynein assembly factor 1, axonemal *ENSDARG0000001203010
lrrc9 / leucine rich repeat containing 9ENSDARG000000543521


Protein motifs (from Interpro)
Interpro ID Name
 IPR001611  Leucine-rich repeat
 IPR003591  Leucine-rich repeat, typical subtype
 IPR032675  Leucine-rich repeat domain superfamily


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0008150 biological_process ND


Pathways (from Reactome)
Pathway description
No match


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
No match
  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

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contact: otassy@igbmc.fr