ENSDARG00000006420


Danio rerio

Features
Gene ID: ENSDARG00000006420
  
Biological name :atrnl1b
  
Synonyms : atrnl1b / attractin-like 1b
  
Possible biological names infered from orthology : ATRNL1 / attractin like 1 / Attractin-like protein 1 / Q5VV63 / Q6A051
  
Species: Danio rerio
  
Chr. number: 12
Strand: -1
Band:
Gene start: 29842836
Gene end: 30032188
  
Corresponding Affymetrix probe sets:
  
Cross references: Ensembl peptide - ENSDARP00000042513
NCBI entrez gene - 569196     See in Manteia.
RefSeq - XM_692563
swissprot - E7F6C7
ZFIN ID - ZDB-GENE-030131-8092
Ensembl - ENSDARG00000006420
  
See expression report in BioGPS
See gene description in Wikigenes
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 ATRNL1ENSGALG00000009152Gallus gallus
 ATRNL1ENSG00000107518Homo sapiens
 Atrnl1ENSMUSG00000054843Mus musculus


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
atrnl1a / attractin-like 1a / ATRNL1* / Q5VV63* / Q6A051* / attractin like 1* / Attractin-like protein 1 *ENSDARG0000007718874
atrn / attractin / O75882* / Q9WU60*ENSDARG0000006216458
megf8 / multiple EGF-like-domains 8 / P60882* / Q7Z7M0* / Multiple epidermal growth factor-like domains protein 8 *ENSDARG0000007975125


Protein motifs (from Interpro)
Interpro ID Name
 IPR000742  EGF-like domain
 IPR000859  CUB domain
 IPR001304  C-type lectin-like
 IPR002049  Laminin EGF domain
 IPR002165  Plexin repeat
 IPR013032  EGF-like, conserved site
 IPR015915  Kelch-type beta propeller
 IPR016186  C-type lectin-like/link domain superfamily
 IPR016187  C-type lectin fold
 IPR016201  PSI domain
 IPR034011  Attractin-like, C-type lectin-like domain


Gene Ontology (GO)
TypeGO IDTermEv.Code
 cellular_componentGO:0016020 membrane IEA
 cellular_componentGO:0016021 integral component of membrane IEA


Pathways (from Reactome)
Pathway description
No match


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
No match
  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

0 s.

 
External programs and data are copyrighted by and are the property of their respective authors.
The Manteia system, data and analyses are provided "as is" with no warranties, expressed or implied as to capabilities or accuracy. User assumes the entire risk as to the results and performance of the software, data and documentation


                   

© Olivier Tassy / Olivier Pourquie 2007-2025
contact: otassy@igbmc.fr