ENSDARG00000006963


Danio rerio

Features
Gene ID: ENSDARG00000006963
  
Biological name :cse1l
  
Synonyms : CSE1 chromosome segregation 1-like (yeast) / cse1l / Q7SZC2
  
Possible biological names infered from orthology : chromosome segregation 1 like / Exportin-2 / P55060 / Q9ERK4
  
Species: Danio rerio
  
Chr. number: 11
Strand: 1
Band:
Gene start: 5468629
Gene end: 5493191
  
Corresponding Affymetrix probe sets: Dr.53.1.S1_at (Zebrafish Array)   
  
Cross references: Ensembl peptide - ENSDARP00000022858
swissprot - Q7SZC2
ZFIN ID - ZDB-GENE-990603-1
Ensembl - ENSDARG00000006963
  
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 CSE1LENSGALG00000004707Gallus gallus
 CSE1LENSG00000124207Homo sapiens
 Cse1lENSMUSG00000002718Mus musculus


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
No match


Protein motifs (from Interpro)
Interpro ID Name
 IPR001494  Importin-beta, N-terminal domain
 IPR005043  CAS/CSE, C-terminal
 IPR011989  Armadillo-like helical
 IPR013713  Exportin/Importin, Cse1-like
 IPR016024  Armadillo-type fold


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0006606 protein import into nucleus IBA
 biological_processGO:0006611 protein export from nucleus IBA
 biological_processGO:0006886 intracellular protein transport IEA
 biological_processGO:0007589 body fluid secretion IMP
 biological_processGO:0015031 protein transport IEA
 cellular_componentGO:0005634 nucleus IEA
 cellular_componentGO:0005635 nuclear envelope IBA
 cellular_componentGO:0005737 cytoplasm IEA
 cellular_componentGO:0005829 cytosol IBA
 cellular_componentGO:0005886 plasma membrane IEA
 cellular_componentGO:0009925 basal plasma membrane IEA
 cellular_componentGO:0016020 membrane IEA
 cellular_componentGO:0016324 apical plasma membrane IEA
 cellular_componentGO:0016328 lateral plasma membrane IEA
 molecular_functionGO:0005049 nuclear export signal receptor activity IBA
 molecular_functionGO:0005515 protein binding IPI
 molecular_functionGO:0008536 Ran GTPase binding IEA


Pathways (from Reactome)
Pathway description
No match


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
 ZFA:0000112 gut gut swollen , abnormal
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 ZFA:0000123 liver liver decreased size , abnormal
liver immature , abnormal
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 ZFA:0001249 exocrine pancreas exocrine pancreas degenerate , abnormal
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 ZFA:0005123 gut epithelium gut epithelium flattened , abnormal
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 ZFA:0005125 intestinal villus intestinal villus flattened , abnormal
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 ZFA:0009269 enterocyte enterocyte decreased height , abnormal
enterocyte microvillus decreased length , abnormal
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Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

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