ENSDARG00000007362


Danio rerio

Features
Gene ID: ENSDARG00000007362
  
Biological name :sft2d1
  
Synonyms : sft2d1 / SFT2 domain containing 1
  
Possible biological names infered from orthology : Gm12166 / Mus musculus SFT2 domain containing 1 (Sft2d1), transcript variant 2, mRNA. / predicted gene 12166 / Q5SSN7 / Q8WV19
  
Species: Danio rerio
  
Chr. number: 13
Strand: 1
Band:
Gene start: 4368504
Gene end: 4400816
  
Corresponding Affymetrix probe sets: Dr.14202.1.S1_s_at (Zebrafish Array)   Dr.26479.1.S1_at (Zebrafish Array)   NM_200372_at (Zebrafish Genome Array with custom cdf files)   
  
Cross references: Ensembl peptide - ENSDARP00000097824
NCBI entrez gene - 393343     See in Manteia.
RefSeq - NM_200372
RefSeq Peptide - NP_956666
swissprot - F1QQJ6
ZFIN ID - ZDB-GENE-040426-1350
Ensembl - ENSDARG00000007362
  
See expression report in BioGPS
See gene description in Wikigenes
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 SFT2D1ENSGALG00000020005Gallus gallus
 Q8WV19ENSG00000198818Homo sapiens
 Q5SSN7ENSMUSG00000073468Mus musculus
 Q5SSN7ENSMUSG00000069899Mus musculus


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
zgc:112392ENSDARG0000007115960
zgc:110788ENSDARG0000007074656


Protein motifs (from Interpro)
Interpro ID Name
 IPR007305  Vesicle transport protein, Got1/SFT2-like
 IPR011691  Vesicle transport protein SFT2


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0015031 protein transport IEA
 biological_processGO:0016192 vesicle-mediated transport IBA
 cellular_componentGO:0016020 membrane IBA
 cellular_componentGO:0016021 integral component of membrane IEA


Pathways (from Reactome)
Pathway description
No match


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
No match
  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

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