ENSDARG00000007418


Danio rerio

Features
Gene ID: ENSDARG00000007418
  
Biological name :chmp4c
  
Synonyms : charged multivesicular body protein 4C / chmp4c
  
Possible biological names infered from orthology : Q96CF2 / Q9D7F7
  
Species: Danio rerio
  
Chr. number: 24
Strand: -1
Band:
Gene start: 11070110
Gene end: 11076400
  
Corresponding Affymetrix probe sets: Dr.14899.1.A1_at (Zebrafish Array)   NM_001017844_at (Zebrafish Genome Array with custom cdf files)   
  
Cross references: Ensembl peptide - ENSDARP00000014221
NCBI entrez gene - 550542     See in Manteia.
RefSeq - NM_001017844
RefSeq Peptide - NP_001017844
swissprot - F1QX75
ZFIN ID - ZDB-GENE-050417-389
Ensembl - ENSDARG00000007418
  
See expression report in BioGPS
See gene description in Wikigenes
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 CHMP4CENSGALG00000043573Gallus gallus
 CHMP4CENSG00000164695Homo sapiens
 Chmp4cENSMUSG00000027536Mus musculus


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
chmp4ba / charged multivesicular body protein 4Ba / CHMP4B* / Q9H444* / charged multivesicular body protein 4B*ENSDARG0000001625562
Q6IQ73 / chmp4bb / charged multivesicular body protein 4Bb / Q9H444* / CHMP4B* / Q9D8B3* / charged multivesicular body protein 4B*ENSDARG0000000732359


Protein motifs (from Interpro)
Interpro ID Name
 IPR005024  Snf7 family


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0007034 vacuolar transport IEA
 cellular_componentGO:0005575 cellular_component ND
 molecular_functionGO:0003674 molecular_function ND


Pathways (from Reactome)
Pathway description
Macroautophagy
Endosomal Sorting Complex Required For Transport (ESCRT)


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
No match
  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

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