ENSDARG00000008142


Danio rerio

Features
Gene ID: ENSDARG00000008142
  
Biological name :stxbp3
  
Synonyms : stxbp3 / syntaxin binding protein 3
  
Possible biological names infered from orthology : O00186 / Q60770
  
Species: Danio rerio
  
Chr. number: 23
Strand: 1
Band:
Gene start: 1661743
Gene end: 1698431
  
Corresponding Affymetrix probe sets: Dr.3691.1.A1_at (Zebrafish Array)   NM_213471_at (Zebrafish Genome Array with custom cdf files)   
  
Cross references: Ensembl peptide - ENSDARP00000044775
NCBI entrez gene - 406780     See in Manteia.
RefSeq - NM_213471
RefSeq - XM_009296575
RefSeq Peptide - NP_998636
swissprot - F1QXJ4
ZFIN ID - ZDB-GENE-040426-2833
Ensembl - ENSDARG00000008142
  
See expression report in BioGPS
See gene description in Wikigenes
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 STXBP3ENSGALG00000002001Gallus gallus
 O00186ENSG00000116266Homo sapiens
 Q60770ENSMUSG00000027882Mus musculus


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
stxbp1a / syntaxin binding protein 1a / STXBP1* / O08599* / P61764* / syntaxin binding protein 1*ENSDARG0000000199439
stxbp1b / syntaxin binding protein 1b / STXBP1* / O08599* / P61764* / syntaxin binding protein 1*ENSDARG0000005603638
stxbp2 / syntaxin binding protein 2 / Q15833*ENSDARG0000000760336


Protein motifs (from Interpro)
Interpro ID Name
 IPR001619  Sec1-like protein


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0006904 vesicle docking involved in exocytosis IEA
 biological_processGO:0016192 vesicle-mediated transport IEA


Pathways (from Reactome)
Pathway description
Disinhibition of SNARE formation


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
 ZFA:0000054 pericardium pericardium edematous , abnormal
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 ZFA:0000107 eye eye decreased size , abnormal
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 ZFA:0000112 gut gut hypoplastic , abnormal
gut quality , abnormal
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 ZFA:0000114 heart heart quality , abnormal
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 ZFA:0000217 inner ear inner ear decreased size , abnormal
inner ear quality , abnormal
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 ZFA:0001094 whole organism whole organism decreased length , abnormal
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 ZFA:0001114 head head circular , abnormal
head decreased size , abnormal
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 ZFA:0001115 trunk trunk decreased length , abnormal
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 ZFA:0001617 otolith otolith decreased size , abnormal
otolith quality , abnormal
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Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

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