ENSDARG00000008796


Danio rerio

Features
Gene ID: ENSDARG00000008796
  
Biological name :her5
  
Synonyms : hairy-related 5 / her5
  
Possible biological names infered from orthology :
  
Species: Danio rerio
  
Chr. number: 14
Strand: 1
Band:
Gene start: 30543008
Gene end: 30544666
  
Corresponding Affymetrix probe sets: Dr.463.1.S1_at (Zebrafish Array)   
  
Cross references: Ensembl peptide - ENSDARP00000123627
swissprot - F1QJS9
ZFIN ID - ZDB-GENE-990415-90
Ensembl - ENSDARG00000008796
  
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
No match


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
her1 / hairy-related 1 / HES7* / Q9BYE0* / Q8BKT2* / Transcription factor HES-7 * / hes family bHLH transcription factor 7*ENSDARG0000001472225
her11 / hairy-related 11 / HES7* / Q9BYE0* / Q8BKT2* / Transcription factor HES-7 * / hes family bHLH transcription factor 7*ENSDARG0000000270720


Protein motifs (from Interpro)
Interpro ID Name
 IPR003650  Orange domain
 IPR011598  Myc-type, basic helix-loop-helix (bHLH) domain


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0006351 transcription, DNA-templated IEA
 biological_processGO:0006355 regulation of transcription, DNA-templated IEA
 biological_processGO:0007492 endoderm development IMP
 biological_processGO:0030917 midbrain-hindbrain boundary development IMP
 biological_processGO:0045737 positive regulation of cyclin-dependent protein serine/threonine kinase activity IMP
 biological_processGO:0048562 embryonic organ morphogenesis IMP
 biological_processGO:0050768 negative regulation of neurogenesis IMP
 cellular_componentGO:0005634 nucleus IC
 molecular_functionGO:0003677 DNA binding IEA
 molecular_functionGO:0003700 DNA-binding transcription factor activity NAS
 molecular_functionGO:0005515 protein binding IPI
 molecular_functionGO:0046982 protein heterodimerization activity IPI
 molecular_functionGO:0046983 protein dimerization activity IEA


Pathways (from Reactome)
Pathway description
No match


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
 ZFA:0000123 liver liver decreased size , abnormal
liver morphology , abnormal
Show

 ZFA:0000140 pancreas pancreas decreased size , abnormal
pancreas morphology , abnormal
Show

 ZFA:0001100 hepatic duct hepatic duct morphology , abnormal
Show

 ZFA:0001372 pancreatic duct pancreatic duct morphology , abnormal
Show

  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

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