ENSDARG00000009447


Danio rerio

Features
Gene ID: ENSDARG00000009447
  
Biological name :atp5mc3b
  
Synonyms : atp5mc3b / ATP synthase membrane subunit c locus 3b
  
Possible biological names infered from orthology : Atp5g3 / ATP5MC3 / ATP synthase F(0) complex subunit C3, mitochondrial / ATP synthase membrane subunit c locus 3 / P48201 / P56384
  
Species: Danio rerio
  
Chr. number: 6
Strand: -1
Band:
Gene start: 10830844
Gene end: 10835922
  
Corresponding Affymetrix probe sets: Dr.1043.1.S1_at (Zebrafish Array)   NM_131761_at (Zebrafish Genome Array with custom cdf files)   
  
Cross references: Ensembl peptide - ENSDARP00000014252
Ensembl peptide - ENSDARP00000113590
NCBI entrez gene - 81541     See in Manteia.
RefSeq - XM_005165783
RefSeq - NM_131761
RefSeq Peptide - NP_571836
swissprot - Q7ZVE5
ZFIN ID - ZDB-GENE-020814-1
Ensembl - ENSDARG00000009447
  
See expression report in BioGPS
See gene description in Wikigenes
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 ATP5G3ENSGALG00000009286Gallus gallus
 P48201ENSG00000154518Homo sapiens
 Atp5g3ENSMUSG00000018770Mus musculus


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
atp5mc3a / ATP synthase membrane subunit c locus 3a / Atp5g3* / P48201* / P56384* / ATP5MC3* / ATP synthase membrane subunit c locus 3* / ATP synthase F(0) complex subunit C3, mitochondrial *ENSDARG0000001777582
atp5mc1 / ATP synthase membrane subunit c locus 1 / Atp5g1* / P05496* / Q9CR84* / ATP synthase F(0) complex subunit C1, mitochondrial *ENSDARG0000005600879


Protein motifs (from Interpro)
Interpro ID Name
 IPR000454  ATP synthase, F0 complex, subunit C
 IPR002379  V-ATPase proteolipid subunit C-like domain
 IPR020537  ATP synthase, F0 complex, subunit C, DCCD-binding site


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0006811 ion transport IEA
 biological_processGO:0015986 ATP synthesis coupled proton transport IBA
 biological_processGO:0015991 ATP hydrolysis coupled proton transport IEA
 cellular_componentGO:0000276 mitochondrial proton-transporting ATP synthase complex, coupling factor F(o) IBA
 cellular_componentGO:0016020 membrane IEA
 cellular_componentGO:0016021 integral component of membrane IEA
 cellular_componentGO:0033177 proton-transporting two-sector ATPase complex, proton-transporting domain IEA
 cellular_componentGO:0045263 proton-transporting ATP synthase complex, coupling factor F(o) IEA
 molecular_functionGO:0008289 lipid binding IEA
 molecular_functionGO:0015078 proton transmembrane transporter activity IEA
 molecular_functionGO:0046933 proton-transporting ATP synthase activity, rotational mechanism IBA


Pathways (from Reactome)
Pathway description
Formation of ATP by chemiosmotic coupling
Cristae formation


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
No match
  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

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