ENSDARG00000009825


Danio rerio

Features
Gene ID: ENSDARG00000009825
  
Biological name :mmp23bb
  
Synonyms : matrix metallopeptidase 23bb / mmp23bb
  
Possible biological names infered from orthology :
  
Species: Danio rerio
  
Chr. number: 18
Strand: 1
Band:
Gene start: 45990394
Gene end: 46005179
  
Corresponding Affymetrix probe sets:
  
Cross references: Ensembl peptide - ENSDARP00000017026
swissprot - F1R0R0
ZFIN ID - ZDB-GENE-050417-448
Ensembl - ENSDARG00000009825
  
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
No match


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
MMP23B / matrix metallopeptidase 23B / O75900*ENSDARG0000004307946
mmp2 / matrix metallopeptidase 2 / P08253* / P33434* / 72 kDa type IV collagenase PEX*ENSDARG0000001767626
mmp19 / matrix metallopeptidase 19 / Q99542* / Q9JHI0* / Matrix metalloproteinase-19 *ENSDARG0000009155725
mmp9 / matrix metallopeptidase 9 / P14780* / P41245* / Matrix metalloproteinase-9 *ENSDARG0000004281624
mmp28 / matrix metallopeptidase 28 / Q9H239* / matrix metallopeptidase 28 (epilysin)*ENSDARG0000005902924
mmp21 / A0A0N9E2K8 / matrix metallopeptidase 21 / Q8N119*ENSDARG0000011249520
CABZ01029422.1ENSDARG0000011643810


Protein motifs (from Interpro)
Interpro ID Name
 IPR001818  Peptidase M10, metallopeptidase
 IPR003582  ShKT domain
 IPR006026  Peptidase, metallopeptidase
 IPR007110  Immunoglobulin-like domain
 IPR013783  Immunoglobulin-like fold
 IPR021190  Peptidase M10A
 IPR024079  Metallopeptidase, catalytic domain superfamily
 IPR033739  Peptidase M10A, catalytic domain


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0001889 liver development IMP
 biological_processGO:0006508 proteolysis IEA
 cellular_componentGO:0031012 extracellular matrix IEA
 molecular_functionGO:0004222 metalloendopeptidase activity IEA
 molecular_functionGO:0008233 peptidase activity IEA
 molecular_functionGO:0008237 metallopeptidase activity IEA
 molecular_functionGO:0008270 zinc ion binding IEA
 molecular_functionGO:0016787 hydrolase activity IEA
 molecular_functionGO:0046872 metal ion binding IEA


Pathways (from Reactome)
Pathway description
No match


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
 ZFA:0000123 liver liver decreased size , abnormal
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Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

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