ENSDARG00000010958


Danio rerio
ubiquitinationglmnbyap-bindingalfglomulinbiologicalprocessregulationproteincytoplasmubiquitin-proteintransferaseinhibitoractivityantigenprocessingproteasomedegradation

Features
Gene ID: ENSDARG00000010958
  
Biological name :glmnb
  
Synonyms : glmnb / glomulin, FKBP associated protein b
  
Possible biological names infered from orthology : GLMN / Glomulin / glomulin, FKBP associated protein / Q8BZM1 / Q92990
  
Species: Danio rerio
  
Chr. number: 6
Strand: -1
Band:
Gene start: 28970513
Gene end: 28980829
  
Corresponding Affymetrix probe sets:
  
Cross references: Ensembl peptide - ENSDARP00000005222
NCBI entrez gene - 100170791     See in Manteia.
RefSeq - NM_001130629
RefSeq Peptide - NP_001124101
swissprot - F1RAT1
ZFIN ID - ZDB-GENE-080723-14
Ensembl - ENSDARG00000010958
  
See expression report in BioGPS
See gene description in Wikigenes
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 GLMNENSGALG00000005959Gallus gallus
 GLMNENSG00000174842Homo sapiens
 GlmnENSMUSG00000029276Mus musculus


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
glmna / glomulin, FKBP associated protein a / GLMN* / Q92990* / Q8BZM1* / Glomulin * / glomulin, FKBP associated protein*ENSDARG0000005826750


Protein motifs (from Interpro)
Interpro ID Name
 IPR013877  YAP-binding/ALF4/Glomulin


Gene Ontology (GO)
nitrogen compound metabolic processcellular metabolic processprimary metabolic processorganic substance metabolic processnitrogen compound metabolic processcellular metabolic processprimary metabolic processorganic substance metabolic processnitrogen compound metabolic processcellular metabolic processprimary metabolic processorganic substance metabolic processnitrogen compound metabolic processcellular metabolic processprimary metabolic processorganic substance metabolic processnitrogen compound metabolic processcellular metabolic processprimary metabolic processorganic substance metabolic processnitrogen compound metabolic processcellular metabolic processprimary metabolic processorganic substance metabolic processnitrogen compound metabolic processcellular metabolic processprimary metabolic processorganic substance metabolic processnitrogen compound metabolic processcellular metabolic processprimary metabolic processorganic substance metabolic processnitrogen compound metabolic processcellular metabolic processprimary metabolic processorganic substance metabolic processnitrogen compound metabolic processcellular metabolic processprimary metabolic processorganic substance metabolic processnitrogen compound metabolic processnitrogen compound metabolic processcellular metabolic processcellular metabolic processprimary metabolic processprimary metabolic processorganic substance metabolic processorganic substance metabolic process
enzyme regulator activityenzyme regulator activityenzyme regulator activityenzyme regulator activityenzyme regulator activityenzyme regulator activityenzyme regulator activityenzyme regulator activityenzyme regulator activityenzyme regulator activityenzyme regulator activityenzyme regulator activity
cellcellcellcellcellcellcellcellcellcellcellcell
TypeGO IDTermEv.Code
 biological_processGO:0008150 biological_process ND
 biological_processGO:0031397 negative regulation of protein ubiquitination IEA
 cellular_componentGO:0005737 cytoplasm IBA
 molecular_functionGO:0055105 ubiquitin-protein transferase inhibitor activity IBA


Pathways (from Reactome)
Pathway description
Antigen processing: Ubiquitination & Proteasome degradation


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
No match
  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

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