ENSDARG00000011418


Danio rerio

Features
Gene ID: ENSDARG00000011418
  
Biological name :sigmar1
  
Synonyms : sigma non-opioid intracellular receptor 1 / sigmar1
  
Possible biological names infered from orthology : O55242 / Q99720
  
Species: Danio rerio
  
Chr. number: 10
Strand: 1
Band:
Gene start: 14488625
Gene end: 14494239
  
Corresponding Affymetrix probe sets: Dr.14927.1.S1_at (Zebrafish Array)   NM_200977_at (Zebrafish Genome Array with custom cdf files)   
  
Cross references: Ensembl peptide - ENSDARP00000011354
NCBI entrez gene - 393952     See in Manteia.
RefSeq - NM_200977
RefSeq Peptide - NP_957271
swissprot - F1QUF7
ZFIN ID - ZDB-GENE-040426-1006
Ensembl - ENSDARG00000011418
  
See expression report in BioGPS
See gene description in Wikigenes
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 Q5ZL84ENSGALG00000028996Gallus gallus
 Q99720ENSG00000147955Homo sapiens
 O55242ENSMUSG00000036078Mus musculus


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
No match


Protein motifs (from Interpro)
Interpro ID Name
 IPR006716  ERG2/sigma1 receptor-like


Gene Ontology (GO)
TypeGO IDTermEv.Code
 cellular_componentGO:0016020 membrane IEA
 cellular_componentGO:0016021 integral component of membrane IEA


Pathways (from Reactome)
Pathway description
No match


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
 ZFA:0001094 whole organism whole organism decreased amount , abnormal
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 ZFA:0009073 glial cell glial cell response to wounding process quality , abnormal
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Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

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contact: otassy@igbmc.fr