ENSDARG00000011801


Danio rerio

Features
Gene ID: ENSDARG00000011801
  
Biological name :wars2
  
Synonyms : tryptophanyl tRNA synthetase 2, mitochondrial / wars2
  
Possible biological names infered from orthology : Q9CYK1 / Q9UGM6
  
Species: Danio rerio
  
Chr. number: 9
Strand: -1
Band:
Gene start: 21072359
Gene end: 21098413
  
Corresponding Affymetrix probe sets: Dr.2479.1.S1_at (Zebrafish Array)   NM_001013323_at (Zebrafish Genome Array with custom cdf files)   
  
Cross references: Ensembl peptide - ENSDARP00000010571
NCBI entrez gene - 503745     See in Manteia.
RefSeq - NM_001013323
RefSeq Peptide - NP_001013341
swissprot - B0S5M9
ZFIN ID - ZDB-GENE-050306-26
Ensembl - ENSDARG00000011801
  
See expression report in BioGPS
See gene description in Wikigenes
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 WARS2ENSGALG00000014772Gallus gallus
 WARS2ENSG00000116874Homo sapiens
 Wars2ENSMUSG00000004233Mus musculus


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
No match


Protein motifs (from Interpro)
Interpro ID Name
 IPR001412  Aminoacyl-tRNA synthetase, class I, conserved site
 IPR002305  Aminoacyl-tRNA synthetase, class Ic
 IPR002306  Tryptophan-tRNA ligase
 IPR014729  Rossmann-like alpha/beta/alpha sandwich fold
 IPR024109  Tryptophan-tRNA ligase, bacterial-type


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0002040 sprouting angiogenesis IMP
 biological_processGO:0006412 translation IEA
 biological_processGO:0006418 tRNA aminoacylation for protein translation IEA
 biological_processGO:0006436 tryptophanyl-tRNA aminoacylation IEA
 cellular_componentGO:0005737 cytoplasm IEA
 molecular_functionGO:0000166 nucleotide binding IEA
 molecular_functionGO:0004812 aminoacyl-tRNA ligase activity IEA
 molecular_functionGO:0004830 tryptophan-tRNA ligase activity IEA
 molecular_functionGO:0005524 ATP binding IEA
 molecular_functionGO:0016874 ligase activity IEA


Pathways (from Reactome)
Pathway description
No match


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
 ZFA:0000054 pericardium pericardium edematous , abnormal
Show

 ZFA:0000114 heart heart edematous , abnormal
heart decreased functionality , abnormal
Show

 ZFA:0000155 somite somite amount , abnormal
Show

 ZFA:0001115 trunk trunk curved , abnormal
Show

 ZFA:0001285 intersegmental vessel intersegmental vessel morphology , abnormal
Show

 ZFA:0001320 endocardium endocardium separated from myocardium , abnormal
Show

 ZFA:0005025 dorsal longitudinal anastomotic vessel dorsal longitudinal anastomotic vessel morphology , abnormal
Show

 ZFA:0005059 trabecular layer trabecular layer endothelial cell decreased amount , abnormal
Show

  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

0 s.

 
External programs and data are copyrighted by and are the property of their respective authors.
The Manteia system, data and analyses are provided "as is" with no warranties, expressed or implied as to capabilities or accuracy. User assumes the entire risk as to the results and performance of the software, data and documentation


                   

© Olivier Tassy / Olivier Pourquie 2007-2025
contact: otassy@igbmc.fr