ENSDARG00000011890


Danio rerio

Features
Gene ID: ENSDARG00000011890
  
Biological name :cry4
  
Synonyms : cry4 / cryptochrome circadian clock 4
  
Possible biological names infered from orthology :
  
Species: Danio rerio
  
Chr. number: 22
Strand: -1
Band:
Gene start: 819656
Gene end: 834106
  
Corresponding Affymetrix probe sets: Dr.10331.1.S1_at (Zebrafish Array)   
  
Cross references: Ensembl peptide - ENSDARP00000096651
NCBI entrez gene - 83775     See in Manteia.
RefSeq - XM_005168277
RefSeq - XM_009295766
swissprot - F1R2R7
ZFIN ID - ZDB-GENE-010426-7
Ensembl - ENSDARG00000011890
  
See expression report in BioGPS
See gene description in Wikigenes
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 CRY4ENSGALG00000000104Gallus gallus


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
cry1ab / cryptochrome circadian clock 1ab / CRY1* / Q16526* / P97784* / Cryptochrome-1 * / cryptochrome circadian regulator 1*ENSDARG0000001158348
cry1aa / cryptochrome circadian clock 1aa / CRY1* / Q16526* / P97784* / Cryptochrome-1 * / cryptochrome circadian regulator 1*ENSDARG0000004576848
cry1ba / cryptochrome circadian clock 1baENSDARG0000006907447
cry2 / cryptochrome circadian clock 2 / Q9R194* / Q49AN0* / Cryptochrome-2 * / cryptochrome circadian regulator 2*ENSDARG0000010240347
cry5 / cryptochrome circadian clock 5ENSDARG0000001949846
cry1bb / cryptochrome circadian clock 1bbENSDARG0000009113145
si:ch1073-390k14.1ENSDARG0000008854923
cry-dash / cryptochrome DASHENSDARG0000000239622


Protein motifs (from Interpro)
Interpro ID Name
 IPR005101  Cryptochrome/DNA photolyase, FAD-binding domain
 IPR006050  DNA photolyase, N-terminal
 IPR014729  Rossmann-like alpha/beta/alpha sandwich fold


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0007165 signal transduction IEA
 cellular_componentGO:0005737 cytoplasm IDA
 molecular_functionGO:0009881 photoreceptor activity IDA


Pathways (from Reactome)
Pathway description
No match


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
No match
  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

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