ENSDARG00000012588


Danio rerio

Features
Gene ID: ENSDARG00000012588
  
Biological name :ptdss1a
  
Synonyms : phosphatidylserine synthase 1a / ptdss1a / Q803C9
  
Possible biological names infered from orthology : P48651 / phosphatidylserine synthase 1 / PTDSS1 / Q99LH2
  
Species: Danio rerio
  
Chr. number: 16
Strand: 1
Band:
Gene start: 53278406
Gene end: 53302453
  
Corresponding Affymetrix probe sets: Dr.13874.1.S1_at (Zebrafish Array)   Dr.13874.2.A1_at (Zebrafish Array)   Dr.13874.2.A1_a_at (Zebrafish Array)   NM_200956_at (Zebrafish Genome Array with custom cdf files)   
  
Cross references: Ensembl peptide - ENSDARP00000026303
NCBI entrez gene - 393931     See in Manteia.
RefSeq - NM_200956
RefSeq Peptide - NP_957250
swissprot - Q803C9
ZFIN ID - ZDB-GENE-040426-837
Ensembl - ENSDARG00000012588
  
See expression report in BioGPS
See gene description in Wikigenes
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 PTDSS1ENSGALG00000030185Gallus gallus
 P48651ENSG00000156471Homo sapiens
 Ptdss1ENSMUSG00000021518Mus musculus


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
ptdss1b / phosphatidylserine synthase 1b / PTDSS1* / P48651* / Q99LH2* / phosphatidylserine synthase 1*ENSDARG0000010211479
E7EY42 / ptdss2 / phosphatidylserine synthase 2 / Q9BVG9* / Q9Z1X2*ENSDARG0000010101830
si:dkey-108k24.2 / P48651* / PTDSS1* / Q99LH2* / phosphatidylserine synthase 1*ENSDARG0000009872910


Protein motifs (from Interpro)
Interpro ID Name
 IPR004277  Phosphatidyl serine synthase


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0006629 lipid metabolic process IEA
 biological_processGO:0006659 phosphatidylserine biosynthetic process IEA
 biological_processGO:0008654 phospholipid biosynthetic process IEA
 cellular_componentGO:0005783 endoplasmic reticulum IEA
 cellular_componentGO:0005789 endoplasmic reticulum membrane IEA
 cellular_componentGO:0016020 membrane IEA
 cellular_componentGO:0016021 integral component of membrane IEA
 molecular_functionGO:0016740 transferase activity IEA


Pathways (from Reactome)
Pathway description
Synthesis of PS


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
No match
  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

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