ENSDARG00000012600


Danio rerio

Features
Gene ID: ENSDARG00000012600
  
Biological name :si:dkey-97a13.6
  
Synonyms : si:dkey-97a13.6
  
Possible biological names infered from orthology :
  
Species: Danio rerio
  
Chr. number: 2
Strand: -1
Band:
Gene start: 41949186
Gene end: 41964402
  
Corresponding Affymetrix probe sets:
  
Cross references: Ensembl peptide - ENSDARP00000122617
swissprot - F1QV93
ZFIN ID - ZDB-GENE-070912-617
Ensembl - ENSDARG00000012600
  
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
No match


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
helz2 / helicase with zinc finger 2, transcriptional coactivatorENSDARG0000001652741
AL935128.1 / HELZ2* / E9QAM5* / Q9BYK8* / helicase with zinc finger 2* / Helicase with zinc finger domain 2 *ENSDARG0000001244626
helz / helicase with zinc finger / P42694*ENSDARG0000003056011
upf1 / upf1 regulator of nonsense transcripts homolog (yeast) / Q92900* / Q9EPU0* / UPF1, RNA helicase and ATPase*ENSDARG000000163025
Q1LXK5 / mov10b.2 / Moloney leukemia virus 10b, tandem duplicate 2 / MOV10* / Q9HCE1* / P23249* / Putative helicase MOV-10 * / Mov10 RISC complex RNA helicase*ENSDARG000000560655
Q1LXK4 / mov10b.1 / Moloney leukemia virus 10b, tandem duplicate 1 / MOV10* / Q9HCE1* / P23249* / Putative helicase MOV-10 * / Mov10 RISC complex RNA helicase*ENSDARG000000611775
mov10a / Mov10 RISC complex RNA helicase a / MOV10* / Q9HCE1* / Mov10 RISC complex RNA helicase*ENSDARG000000158294


Protein motifs (from Interpro)
Interpro ID Name
 IPR012340  Nucleic acid-binding, OB-fold
 IPR027417  P-loop containing nucleoside triphosphate hydrolase
 IPR031191  Helicase with zinc finger domain 2


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:1903506 regulation of nucleic acid-templated transcription IEA
 molecular_functionGO:0030374 nuclear receptor transcription coactivator activity IEA


Pathways (from Reactome)
Pathway description
No match


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
No match
  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

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