ENSDARG00000012848


Danio rerio

Features
Gene ID: ENSDARG00000012848
  
Biological name :arih2
  
Synonyms : ariadne homolog 2 (Drosophila) / arih2
  
Possible biological names infered from orthology : ariadne RBR E3 ubiquitin protein ligase 2 / Mus musculus ariadne RBR E3 ubiquitin protein ligase 2 (Arih2), transcript variant 2, mRNA. / O95376 / Q9Z1K6
  
Species: Danio rerio
  
Chr. number: 8
Strand: 1
Band:
Gene start: 26034623
Gene end: 26057401
  
Corresponding Affymetrix probe sets: Dr.25750.1.S1_at (Zebrafish Array)   NM_213143_at (Zebrafish Genome Array with custom cdf files)   
  
Cross references: Ensembl peptide - ENSDARP00000117296
Ensembl peptide - ENSDARP00000011198
NCBI entrez gene - 406417     See in Manteia.
RefSeq - NM_213143
RefSeq - XM_009303988
RefSeq Peptide - NP_998308
swissprot - Q7T355
swissprot - A8WIS6
ZFIN ID - ZDB-GENE-040426-2158
Ensembl - ENSDARG00000012848
  
See expression report in BioGPS
See gene description in Wikigenes
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 ARIH2ENSGALG00000006956Gallus gallus
 ARIH2ENSG00000177479Homo sapiens
 Arih2ENSMUSG00000064145Mus musculus


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
arih1 / Q6PFJ9 / ariadne ubiquitin-conjugating enzyme E2 binding protein homolog 1 (Drosophila) / Q9Z1K5* / Q9Y4X5* / E3 ubiquitin-protein ligase ARIH1 * / ariadne RBR E3 ubiquitin protein ligase 1*ENSDARG0000000361633
arih1l / Q6NW85 / ariadne homolog, ubiquitin-conjugating enzyme E2 binding protein, 1 like / ARIH1* / Q9Z1K5* / Q9Y4X5* / E3 ubiquitin-protein ligase ARIH1 * / ariadne RBR E3 ubiquitin prot...ENSDARG0000003687033
ankib1b / ankyrin repeat and IBR domain containing 1b / ANKIB1* / Q6ZPS6* / Q9P2G1* / ankyrin repeat and IBR domain containing 1* / Ankyrin repeat and IBR domain-containing protein 1 *ENSDARG0000007682928
Q1L8G6 / ankib1a / ankyrin repeat and IBR domain containing 1a / ANKIB1* / Q6ZPS6* / Q9P2G1* / ankyrin repeat and IBR domain containing 1* / Ankyrin repeat and IBR domain-containing protein 1 *ENSDARG0000006076826


Protein motifs (from Interpro)
Interpro ID Name
 IPR001841  Zinc finger, RING-type
 IPR002867  IBR domain
 IPR013083  Zinc finger, RING/FYVE/PHD-type
 IPR017907  Zinc finger, RING-type, conserved site
 IPR031127  E3 ubiquitin ligase RBR family


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0000209 protein polyubiquitination IBA
 biological_processGO:0016567 protein ubiquitination IEA
 biological_processGO:0032436 positive regulation of proteasomal ubiquitin-dependent protein catabolic process IBA
 cellular_componentGO:0000151 ubiquitin ligase complex IBA
 cellular_componentGO:0005737 cytoplasm IBA
 molecular_functionGO:0004842 ubiquitin-protein transferase activity IEA
 molecular_functionGO:0016740 transferase activity IEA
 molecular_functionGO:0031624 ubiquitin conjugating enzyme binding IBA
 molecular_functionGO:0046872 metal ion binding IEA
 molecular_functionGO:0061630 ubiquitin protein ligase activity IBA


Pathways (from Reactome)
Pathway description
Antigen processing: Ubiquitination & Proteasome degradation


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
No match
  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

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