ENSDARG00000013669


Danio rerio
transportnapbaproteinnsfattachmentintracellularsnarecomplexmembraneretrogradetraffictetratricopeptide-likehelicaldomainsuperfamilydisassemblyfusionvacuolarsolubleactivitysyntaxinbindingcopii-mediatedvesiclecopi-mediatedanterogradecopi-dependentgolgi-to-erintra-golgitrans-golgi-network

Features
Gene ID: ENSDARG00000013669
  
Biological name :napba
  
Synonyms : napba / N-ethylmaleimide-sensitive factor attachment protein, beta a
  
Possible biological names infered from orthology : Beta-soluble NSF attachment protein / NAPB / NSF attachment protein beta / P28663 / Q9H115
  
Species: Danio rerio
  
Chr. number: 17
Strand: -1
Band:
Gene start: 4297076
Gene end: 4318428
  
Corresponding Affymetrix probe sets: Dr.16364.1.A1_at (Zebrafish Array)   
  
Cross references: Ensembl peptide - ENSDARP00000129156
Ensembl peptide - ENSDARP00000135806
swissprot - E7FE03
swissprot - X1WG01
ZFIN ID - ZDB-GENE-050522-230
Ensembl - ENSDARG00000013669
  
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 NAPBENSGALG00000008313Gallus gallus
 NAPBENSG00000125814Homo sapiens
 NapbENSMUSG00000027438Mus musculus


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
napbb / N-ethylmaleimide-sensitive factor attachment protein, beta b / NAPB* / Q9H115* / P28663* / NSF attachment protein beta* / Beta-soluble NSF attachment protein *ENSDARG0000006910192
napab / N-ethylmaleimide-sensitive factor attachment protein, alpha b / NAPA* / Q9DB05* / P54920* / NSF attachment protein alpha* / Alpha-soluble NSF attachment protein *ENSDARG0000002040577
napaa / N-ethylmaleimide-sensitive factor attachment protein, alpha a / NAPA* / Q9DB05* / P54920* / NSF attachment protein alpha* / Alpha-soluble NSF attachment protein *ENSDARG0000006760572


Protein motifs (from Interpro)
Interpro ID Name
 IPR000744  NSF attachment protein
 IPR011990  Tetratricopeptide-like helical domain superfamily


Gene Ontology (GO)
macromolecule localizationestablishment of localizationcellular localizationcellular component organizationmacromolecule localizationestablishment of localizationcellular localizationcellular component organizationmacromolecule localizationestablishment of localizationcellular localizationcellular component organizationmacromolecule localizationestablishment of localizationcellular localizationcellular component organizationmacromolecule localizationestablishment of localizationcellular localizationcellular component organizationmacromolecule localizationestablishment of localizationcellular localizationcellular component organizationmacromolecule localizationestablishment of localizationcellular localizationcellular component organizationmacromolecule localizationestablishment of localizationcellular localizationcellular component organizationmacromolecule localizationestablishment of localizationcellular localizationcellular component organizationmacromolecule localizationestablishment of localizationcellular localizationcellular component organizationmacromolecule localizationmacromolecule localizationestablishment of localizationestablishment of localizationcellular localizationcellular localizationcellular component organizationcellular component organization
protein bindingprotein bindingprotein bindingprotein bindingprotein bindingprotein bindingprotein bindingprotein bindingprotein bindingprotein bindingprotein bindingprotein binding
cellmembraneorganelleprotein-containing complexcellmembraneorganelleprotein-containing complexcellmembraneorganelleprotein-containing complexcellmembraneorganelleprotein-containing complexcellmembraneorganelleprotein-containing complexcellmembraneorganelleprotein-containing complexcellmembraneorganelleprotein-containing complexcellmembraneorganelleprotein-containing complexcellmembraneorganelleprotein-containing complexcellmembraneorganelleprotein-containing complexcellcellmembranemembraneorganelleorganelleprotein-containing complexprotein-containing complex
TypeGO IDTermEv.Code
 biological_processGO:0006886 intracellular protein transport IBA
 biological_processGO:0035494 SNARE complex disassembly IBA
 biological_processGO:0061025 membrane fusion IBA
 cellular_componentGO:0005622 intracellular IEA
 cellular_componentGO:0005774 vacuolar membrane IBA
 cellular_componentGO:0031201 SNARE complex IBA
 molecular_functionGO:0005483 soluble NSF attachment protein activity IBA
 molecular_functionGO:0019905 syntaxin binding IBA


Pathways (from Reactome)
Pathway description
COPII-mediated vesicle transport
COPI-mediated anterograde transport
COPI-dependent Golgi-to-ER retrograde traffic
Intra-Golgi traffic
Retrograde transport at the Trans-Golgi-Network


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
No match
  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

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