ENSDARG00000013749


Danio rerio
slc25a55bcarriertransporttransmembranemembraneproteinsubstratesolutedomainsuperfamilyl-glutamateinnerintegralcomponenthigh-affinityglutamatetransporteractivity

Features
Gene ID: ENSDARG00000013749
  
Biological name :slc25a55b
  
Synonyms : slc25a55b / solute carrier family 25, member 55b
  
Possible biological names infered from orthology :
  
Species: Danio rerio
  
Chr. number: 23
Strand: 1
Band:
Gene start: 409578
Gene end: 419441
  
Corresponding Affymetrix probe sets: Dr.25199.1.A1_at (Zebrafish Array)   NM_001003448_at (Zebrafish Genome Array with custom cdf files)   
  
Cross references: Ensembl peptide - ENSDARP00000014929
NCBI entrez gene - 445054     See in Manteia.
RefSeq - NM_001003448
RefSeq Peptide - NP_001003448
swissprot - Q6DHS4
ZFIN ID - ZDB-GENE-040801-184
Ensembl - ENSDARG00000013749
  
See expression report in BioGPS
See gene description in Wikigenes
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
No match


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
slc25a55a / solute carrier family 25, member 55aENSDARG0000002089376
slc25a22a / solute carrier family 25 member 22a / Q9H936* / Q9D6M3* / SLC25A22* / solute carrier family 25 member 22* / solute carrier family 25 (mitochondrial carrier, glutamate), member 22*ENSDARG0000002071866
slc25a22b / solute carrier family 25 member 22b / Q9H936* / Q9D6M3* / SLC25A22* / solute carrier family 25 member 22* / solute carrier family 25 (mitochondrial carrier, glutamate), member 22*ENSDARG0000005833665
slc25a18 / solute carrier family 25 (glutamate carrier), member 18 / Q9H1K4* / Q9DB41* / solute carrier family 25 member 18* / solute carrier family 25 (mitochondrial carrier), member 18*ENSDARG0000007071763
slc25a12 / solute carrier family 25 (aspartate/glutamate carrier), member 12ENSDARG0000010236239
slc25a13 / solute carrier family 25 (aspartate/glutamate carrier), member 13 / Q9UJS0* / Q9QXX4* / solute carrier family 25 member 13* / solute carrier family 25 (mitochondrial carrier, ade...ENSDARG0000009935338
slc25a44b / solute carrier family 25, member 44 b / Q8BGF9* / Q96H78* / SLC25A44* / solute carrier family 25 member 44*ENSDARG0000003590521
slc25a44a / solute carrier family 25, member 44 a / Q8BGF9* / Q96H78* / SLC25A44* / solute carrier family 25 member 44*ENSDARG0000004592720


Protein motifs (from Interpro)
Interpro ID Name
 IPR002067  Mitochondrial carrier protein
 IPR018108  Mitochondrial substrate/solute carrier
 IPR023395  Mitochondrial carrier domain superfamily


Gene Ontology (GO)
establishment of localizationresponse to chemicalestablishment of localizationresponse to chemicalestablishment of localizationresponse to chemicalestablishment of localizationresponse to chemicalestablishment of localizationresponse to chemicalestablishment of localizationresponse to chemicalestablishment of localizationresponse to chemicalestablishment of localizationresponse to chemicalestablishment of localizationresponse to chemicalestablishment of localizationresponse to chemicalestablishment of localizationestablishment of localizationresponse to chemicalresponse to chemical
neurotransmitter transporter activitytransmembrane transporter activityneurotransmitter transporter activitytransmembrane transporter activityneurotransmitter transporter activitytransmembrane transporter activityneurotransmitter transporter activitytransmembrane transporter activityneurotransmitter transporter activitytransmembrane transporter activityneurotransmitter transporter activitytransmembrane transporter activityneurotransmitter transporter activitytransmembrane transporter activityneurotransmitter transporter activitytransmembrane transporter activityneurotransmitter transporter activitytransmembrane transporter activityneurotransmitter transporter activitytransmembrane transporter activityneurotransmitter transporter activityneurotransmitter transporter activitytransmembrane transporter activitytransmembrane transporter activity
cellmembraneorganellecellmembraneorganellecellmembraneorganellecellmembraneorganellecellmembraneorganellecellmembraneorganellecellmembraneorganellecellmembraneorganellecellmembraneorganellecellmembraneorganellecellcellmembranemembraneorganelleorganelle
TypeGO IDTermEv.Code
 biological_processGO:0006839 mitochondrial transport IBA
 biological_processGO:0015813 L-glutamate transmembrane transport IEA
 biological_processGO:0055085 transmembrane transport IEA
 cellular_componentGO:0005743 mitochondrial inner membrane IBA
 cellular_componentGO:0016020 membrane IEA
 cellular_componentGO:0016021 integral component of membrane IBA
 molecular_functionGO:0005314 high-affinity glutamate transmembrane transporter activity IBA


Pathways (from Reactome)
Pathway description
No match


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
No match
  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

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