ENSDARG00000014916


Danio rerio

Features
Gene ID: ENSDARG00000014916
  
Biological name :slc10a2
  
Synonyms : slc10a2 / solute carrier family 10 (sodium/bile acid cotransporter), member 2
  
Possible biological names infered from orthology : P70172 / Q12908 / solute carrier family 10 member 2
  
Species: Danio rerio
  
Chr. number: 9
Strand: 1
Band:
Gene start: 27339505
Gene end: 27344683
  
Corresponding Affymetrix probe sets: Dr.26482.1.S1_at (Zebrafish Array)   NM_200358_at (Zebrafish Genome Array with custom cdf files)   
  
Cross references: Ensembl peptide - ENSDARP00000024256
NCBI entrez gene - 393329     See in Manteia.
RefSeq - NM_200358
RefSeq Peptide - NP_956652
swissprot - Q7T3A9
ZFIN ID - ZDB-GENE-040426-1328
Ensembl - ENSDARG00000014916
  
See expression report in BioGPS
See gene description in Wikigenes
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 SLC10A2ENSGALG00000016858Gallus gallus
 Q12908ENSG00000125255Homo sapiens
 P70172ENSMUSG00000023073Mus musculus


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
slc10a4 / solute carrier family 10, member 4 / Q96EP9* / Gm5868* / Q3UEZ8* / solute carrier family 10 (sodium/bile acid cotransporter family), member 4*ENSDARG0000000913130
slc10a1 / solute carrier family 10 (sodium/bile acid cotransporter), member 1 / Q14973* / O08705* / solute carrier family 10 member 1* / solute carrier family 10 (sodium/bile acid cotranspo...ENSDARG0000003058830
slc10a3 / solute carrier family 10, member 3 / P09131* / P21129* / solute carrier family 10 (sodium/bile acid cotransporter family), member 3*ENSDARG0000010322023


Protein motifs (from Interpro)
Interpro ID Name
 IPR002657  Bile acid:sodium symporter/arsenical resistance protein Acr3
 IPR004710  Bile acid:sodium symporter
 IPR030207  Solute carrier family 10 member 2


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0015721 bile acid and bile salt transport IEA
 biological_processGO:0015850 organic hydroxy compound transport IDA
 cellular_componentGO:0016020 membrane IEA
 cellular_componentGO:0016021 integral component of membrane IEA
 cellular_componentGO:0016324 apical plasma membrane IEA
 molecular_functionGO:0008508 bile acid:sodium symporter activity IEA


Pathways (from Reactome)
Pathway description
Recycling of bile acids and salts


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
No match
  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

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