ENSDARG00000014953


Danio rerio

Features
Gene ID: ENSDARG00000014953
  
Biological name :cnih3
  
Synonyms : cnih3 / cornichon family AMPA receptor auxiliary protein 3
  
Possible biological names infered from orthology : 3 / Q6ZWS4 / Q8TBE1
  
Species: Danio rerio
  
Chr. number: 20
Strand: 1
Band:
Gene start: 36233873
Gene end: 36298140
  
Corresponding Affymetrix probe sets:
  
Cross references: Ensembl peptide - ENSDARP00000123101
Ensembl peptide - ENSDARP00000144764
Ensembl peptide - ENSDARP00000152791
NCBI entrez gene - 564015     See in Manteia.
RefSeq - XM_687375
RefSeq - XM_005160806
swissprot - Q5RIH0
ZFIN ID - ZDB-GENE-041001-180
Ensembl - ENSDARG00000014953
  
See expression report in BioGPS
See gene description in Wikigenes
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 CNIH3ENSGALG00000009308Gallus gallus
 CNIH3ENSG00000143786Homo sapiens
 3 ENSMUSG00000026514Mus musculus


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
cnih2 / Q5BL21 / cornichon family AMPA receptor auxiliary protein 2 / 2 * / O35089* / Q6PI25*ENSDARG0000004366269
cnih1 / cornichon family AMPA receptor auxiliary protein 1 / 1 * / O35372* / O95406*ENSDARG0000002031160
cnih4 / cornichon family AMPA receptor auxiliary protein 4 / Q9P003*ENSDARG0000008775922


Protein motifs (from Interpro)
Interpro ID Name
 IPR003377  Cornichon


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0016192 vesicle-mediated transport IEA
 cellular_componentGO:0016020 membrane IEA
 cellular_componentGO:0016021 integral component of membrane IEA


Pathways (from Reactome)
Pathway description
COPII-mediated vesicle transport
Cargo concentration in the ER


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
No match
  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
 ENSDARG00000032714 gria1b / glutamate receptor, ionotropic, AMPA 1b / GRIA1* / P23818* / P42261* / Glutamate receptor 1 * / glutamate ionotropic receptor AMPA type subunit 1*  / complex / reaction






 

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