ENSDARG00000015946


Danio rerio

Features
Gene ID: ENSDARG00000015946
  
Biological name :slc44a1a
  
Synonyms : slc44a1a / solute carrier family 44 (choline transporter), member 1a
  
Possible biological names infered from orthology : Q6X893 / Q8WWI5 / SLC44A1 / solute carrier family 44 member 1
  
Species: Danio rerio
  
Chr. number: 1
Strand: 1
Band:
Gene start: 52632856
Gene end: 52652163
  
Corresponding Affymetrix probe sets:
  
Cross references: Ensembl peptide - ENSDARP00000007186
Ensembl peptide - ENSDARP00000121604
NCBI entrez gene - 100333377     See in Manteia.
swissprot - B8A445
swissprot - F1Q9M4
ZFIN ID - ZDB-GENE-050417-204
Ensembl - ENSDARG00000015946
  
See expression report in BioGPS
See gene description in Wikigenes
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 SLC44A1ENSGALG00000015439Gallus gallus
 Q8WWI5ENSG00000070214Homo sapiens
 Q6X893ENSMUSG00000028412Mus musculus


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
slc44a1b / solute carrier family 44 (choline transporter), member 1b / Q6X893* / Q8WWI5* / SLC44A1* / solute carrier family 44 member 1*ENSDARG0000009098272
slc44a2 / solute carrier family 44 (choline transporter), member 2 / Q8BY89* / Q8IWA5* / solute carrier family 44 member 2*ENSDARG0000003705927
slc44a5b / solute carrier family 44, member 5b / Q5RJI2* / Q8NCS7* / SLC44A5* / solute carrier family 44 member 5*ENSDARG0000005741927
slc44a5a / solute carrier family 44, member 5a / Q5RJI2* / Q8NCS7* / SLC44A5* / solute carrier family 44 member 5*ENSDARG0000001739826
CABZ01088282.1 / Q53GD3* / Q91VA1* / SLC44A4* / solute carrier family 44 member 4*ENSDARG0000010238123


Protein motifs (from Interpro)
Interpro ID Name
 IPR007603  Choline transporter-like


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0007605 sensory perception of sound IMP
 cellular_componentGO:0016020 membrane IEA
 cellular_componentGO:0016021 integral component of membrane IEA
 molecular_functionGO:0003674 molecular_function ND


Pathways (from Reactome)
Pathway description
Synthesis of PC
Transport of bile salts and organic acids, metal ions and amine compounds
Choline catabolism


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
No match
  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

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