ENSDARG00000017579


Danio rerio

Features
Gene ID: ENSDARG00000017579
  
Biological name :si:ch211-195b15.7
  
Synonyms : si:ch211-195b15.7
  
Possible biological names infered from orthology :
  
Species: Danio rerio
  
Chr. number: 3
Strand: -1
Band:
Gene start: 32458720
Gene end: 32472155
  
Corresponding Affymetrix probe sets: Dr.9912.1.A1_at (Zebrafish Array)   
  
Cross references: Ensembl peptide - ENSDARP00000129213
NCBI entrez gene - 557783     See in Manteia.
RefSeq - XM_009299571
RefSeq - XM_680904
swissprot - X1WG58
ZFIN ID - ZDB-GENE-131121-183
Ensembl - ENSDARG00000017579
  
See expression report in BioGPS
See gene description in Wikigenes
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
No match


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
ric8a / RIC8 guanine nucleotide exchange factor A / Q3TIR3* / Q9NPQ8* / Synembryn-A *ENSDARG0000000724741
ric8b / RIC8 guanine nucleotide exchange factor B / Q80XE1* / Q9NVN3* / Synembryn-B *ENSDARG0000000597236
si:dkey-94f20.4ENSDARG0000001692321


Protein motifs (from Interpro)
Interpro ID Name
 IPR008376  Synembryn
 IPR011989  Armadillo-like helical
 IPR016024  Armadillo-type fold
 IPR019318  Guanine nucleotide exchange factor, Ric8


Gene Ontology (GO)
TypeGO IDTermEv.Code
 cellular_componentGO:0005737 cytoplasm IDA


Pathways (from Reactome)
Pathway description
No match


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
 ZFA:0001094 whole organism whole organism anterior-posterior axis curved , abnormal
Show

 ZFA:0001261 ventricular system ventricular system hydrocephalic , abnormal
Show

  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

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contact: otassy@igbmc.fr