ENSDARG00000017658


Danio rerio

Features
Gene ID: ENSDARG00000017658
  
Biological name :gmppb
  
Synonyms : GDP-mannose pyrophosphorylase B / gmppb
  
Possible biological names infered from orthology : Q8BTZ7 / Q9Y5P6
  
Species: Danio rerio
  
Chr. number: 22
Strand: 1
Band:
Gene start: 39084107
Gene end: 39097217
  
Corresponding Affymetrix probe sets: Dr.24292.2.S1_at (Zebrafish Array)   NM_001003491_at (Zebrafish Genome Array with custom cdf files)   
  
Cross references: Ensembl peptide - ENSDARP00000022618
Ensembl peptide - ENSDARP00000149007
NCBI entrez gene - 445097     See in Manteia.
RefSeq - NM_001003491
RefSeq Peptide - NP_001003491
swissprot - F1R683
ZFIN ID - ZDB-GENE-040801-234
Ensembl - ENSDARG00000017658
  
See expression report in BioGPS
See gene description in Wikigenes
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 GMPPBENSGALG00000002500Gallus gallus
 GMPPBENSG00000173540Homo sapiens
 GmppbENSMUSG00000070284Mus musculus


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
gmppab / GDP-mannose pyrophosphorylase Ab / GMPPA* / Q922H4* / Q96IJ6* / GDP-mannose pyrophosphorylase A*ENSDARG0000002349836
gmppaa / Q6GMK8 / GDP-mannose pyrophosphorylase Aa / GMPPA* / Q96IJ6* / GDP-mannose pyrophosphorylase A*ENSDARG0000002411236


Protein motifs (from Interpro)
Interpro ID Name
 IPR001451  Hexapeptide repeat
 IPR005835  Nucleotidyl transferase domain
 IPR018357  Hexapeptide transferase, conserved site
 IPR029044  Nucleotide-diphospho-sugar transferases


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0009058 biosynthetic process IEA
 molecular_functionGO:0016740 transferase activity IEA
 molecular_functionGO:0016779 nucleotidyltransferase activity IEA


Pathways (from Reactome)
Pathway description
No match


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
 ZFA:0000107 eye eye decreased size , abnormal
Show

 ZFA:0001089 myoseptum myoseptum increased width , abnormal
myoseptum damaged , abnormal
Show

 ZFA:0001094 whole organism whole organism decreased length , abnormal
whole organism decreased pigmentation , abnormal
whole organism decreased mobility , abnormal
Show

 ZFA:0001117 post-vent region post-vent region bent , abnormal
Show

 ZFA:0005145 muscle muscle sarcolemma damaged , abnormal
Show

 ZFA:0009115 skeletal muscle cell skeletal muscle cell disorganized , abnormal
skeletal muscle cell sparse , abnormal
Show

  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

0 s.

 
External programs and data are copyrighted by and are the property of their respective authors.
The Manteia system, data and analyses are provided "as is" with no warranties, expressed or implied as to capabilities or accuracy. User assumes the entire risk as to the results and performance of the software, data and documentation


                   

© Olivier Tassy / Olivier Pourquie 2007-2025
contact: otassy@igbmc.fr