ENSDARG00000018008


Danio rerio

Features
Gene ID: ENSDARG00000018008
  
Biological name :mdh1b
  
Synonyms : malate dehydrogenase 1B, NAD (soluble) / mdh1b
  
Possible biological names infered from orthology : malate dehydrogenase 1B / Putative malate dehydrogenase 1B / Q5F204 / Q5I0G3
  
Species: Danio rerio
  
Chr. number: 1
Strand: -1
Band:
Gene start: 6218632
Gene end: 6225285
  
Corresponding Affymetrix probe sets:
  
Cross references: Ensembl peptide - ENSDARP00000116491
NCBI entrez gene - 767794     See in Manteia.
RefSeq - NM_001076761
RefSeq Peptide - NP_001070229
swissprot - F1R1U0
ZFIN ID - ZDB-GENE-060929-384
Ensembl - ENSDARG00000018008
  
See expression report in BioGPS
See gene description in Wikigenes
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 MDH1BENSGALG00000008548Gallus gallus
 MDH1BENSG00000138400Homo sapiens
 Mdh1bENSMUSG00000025963Mus musculus


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
mdh1aa / malate dehydrogenase 1Aa, NAD (soluble) / MDH1* / P14152* / P40925* / malate dehydrogenase 1* / Malate dehydrogenase, cytoplasmic *ENSDARG0000001777219
mdh1ab / malate dehydrogenase 1Ab, NAD (soluble) / MDH1* / P14152* / P40925* / malate dehydrogenase 1* / Malate dehydrogenase, cytoplasmic *ENSDARG0000010384914


Protein motifs (from Interpro)
Interpro ID Name
 IPR010945  Malate dehydrogenase, type 2
 IPR015955  Lactate dehydrogenase/glycoside hydrolase, family 4, C-terminal
 IPR016040  NAD(P)-binding domain
 IPR022383  Lactate/malate dehydrogenase, C-terminal


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0005975 carbohydrate metabolic process IEA
 biological_processGO:0006108 malate metabolic process IEA
 biological_processGO:0055114 oxidation-reduction process IEA
 molecular_functionGO:0003824 catalytic activity IEA
 molecular_functionGO:0016615 malate dehydrogenase activity IEA
 molecular_functionGO:0016616 oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor IEA


Pathways (from Reactome)
Pathway description
No match


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
No match
  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

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