ENSDARG00000018936


Danio rerio

Features
Gene ID: ENSDARG00000018936
  
Biological name :zcchc17
  
Synonyms : zcchc17 / zinc finger, CCHC domain containing 17
  
Possible biological names infered from orthology : Q9ESX4 / Q9NP64 / zinc finger CCHC-type containing 17
  
Species: Danio rerio
  
Chr. number: 19
Strand: -1
Band:
Gene start: 42996968
Gene end: 43004356
  
Corresponding Affymetrix probe sets: Dr.18234.1.A1_at (Zebrafish Array)   Dr.24310.1.S1_at (Zebrafish Array)   NM_200544_at (Zebrafish Genome Array with custom cdf files)   
  
Cross references: Ensembl peptide - ENSDARP00000088874
NCBI entrez gene - 393516     See in Manteia.
RefSeq - NM_200544
RefSeq Peptide - NP_956838
swissprot - F1QI96
ZFIN ID - ZDB-GENE-040325-2
Ensembl - ENSDARG00000018936
  
See expression report in BioGPS
See gene description in Wikigenes
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 ZCCHC17ENSGALG00000000618Gallus gallus
 Q9NP64ENSG00000121766Homo sapiens
 Q9ESX4ENSMUSG00000028772Mus musculus


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
No match


Protein motifs (from Interpro)
Interpro ID Name
 IPR001878  Zinc finger, CCHC-type
 IPR003029  S1 domain
 IPR012340  Nucleic acid-binding, OB-fold
 IPR022967  RNA-binding domain, S1


Gene Ontology (GO)
TypeGO IDTermEv.Code
 molecular_functionGO:0003676 nucleic acid binding IEA
 molecular_functionGO:0008270 zinc ion binding IEA


Pathways (from Reactome)
Pathway description
No match


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
No match
  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

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