ENSDARG00000019526


Danio rerio

Features
Gene ID: ENSDARG00000019526
  
Biological name :agfg1b
  
Synonyms : agfg1b / ArfGAP with FG repeats 1b
  
Possible biological names infered from orthology : AGFG1 / Arf-GAP domain and FG repeat-containing protein 1 / ArfGAP with FG repeats 1 / P52594 / Q8K2K6
  
Species: Danio rerio
  
Chr. number: 2
Strand: 1
Band:
Gene start: 16460321
Gene end: 16479291
  
Corresponding Affymetrix probe sets: Dr.19406.1.A1_at (Zebrafish Array)   
  
Cross references: Ensembl peptide - ENSDARP00000118652
Ensembl peptide - ENSDARP00000119105
NCBI entrez gene - 393560     See in Manteia.
RefSeq - NM_200588
RefSeq Peptide - NP_956882
swissprot - B0UXM0
swissprot - B0UXL9
ZFIN ID - ZDB-GENE-040426-1520
Ensembl - ENSDARG00000019526
  
See expression report in BioGPS
See gene description in Wikigenes
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 AGFG1ENSGALG00000003052Gallus gallus
 AGFG1ENSG00000173744Homo sapiens
 Agfg1ENSMUSG00000026159Mus musculus


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
agfg1a / ArfGAP with FG repeats 1a / AGFG1* / P52594* / Q8K2K6* / ArfGAP with FG repeats 1* / Arf-GAP domain and FG repeat-containing protein 1 *ENSDARG0000003002064
zgc:114045 / AGFG2* / O95081* / Q80WC7* / ArfGAP with FG repeats 2* / Arf-GAP domain and FG repeat-containing protein 2 *ENSDARG0000006933427


Protein motifs (from Interpro)
Interpro ID Name
 IPR001164  Arf GTPase activating protein


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0043547 positive regulation of GTPase activity IEA
 cellular_componentGO:0005575 cellular_component ND
 molecular_functionGO:0005096 GTPase activator activity IEA
 molecular_functionGO:0046872 metal ion binding IEA


Pathways (from Reactome)
Pathway description
Cargo recognition for clathrin-mediated endocytosis
Clathrin-mediated endocytosis


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
No match
  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
 ENSDARG00000030775 sybl1 / synaptobrevin-like 1 / VAMP7* / P51809* / vesicle associated membrane protein 7*  / complex / reaction






 

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