ENSDARG00000019636


Danio rerio

Features
Gene ID: ENSDARG00000019636
  
Biological name :yif1a
  
Synonyms : Q6PC24 / yif1a / Yip1 interacting factor homolog A (S. cerevisiae)
  
Possible biological names infered from orthology : O95070 / Q91XB7 / Yip1 interacting factor homolog A, membrane trafficking protein
  
Species: Danio rerio
  
Chr. number: 14
Strand: 1
Band:
Gene start: 30753666
Gene end: 30759503
  
Corresponding Affymetrix probe sets: Dr.412.1.S1_at (Zebrafish Array)   NM_199931_at (Zebrafish Genome Array with custom cdf files)   
  
Cross references: Ensembl peptide - ENSDARP00000142616
Ensembl peptide - ENSDARP00000018303
Ensembl peptide - ENSDARP00000115104
NCBI entrez gene - 334982     See in Manteia.
RefSeq - NM_199931
RefSeq - XM_009291093
RefSeq Peptide - NP_956225
swissprot - Q6PC24
swissprot - A0A140LH86
ZFIN ID - ZDB-GENE-030131-6922
Ensembl - ENSDARG00000019636
  
See expression report in BioGPS
See gene description in Wikigenes
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 YIF1AENSG00000174851Homo sapiens
 Yif1aENSMUSG00000024875Mus musculus


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
yif1b / Yip1 interacting factor homolog B (S. cerevisiae) / Q5BJH7* / Q9CX30* / Yip1 interacting factor homolog B, membrane trafficking protein*ENSDARG0000004050552


Protein motifs (from Interpro)
Interpro ID Name
 IPR005578  Yif1 family


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0006888 ER to Golgi vesicle-mediated transport IBA
 biological_processGO:0015031 protein transport IEA
 biological_processGO:0016192 vesicle-mediated transport IEA
 cellular_componentGO:0000139 Golgi membrane IEA
 cellular_componentGO:0005783 endoplasmic reticulum IEA
 cellular_componentGO:0005789 endoplasmic reticulum membrane IEA
 cellular_componentGO:0005793 endoplasmic reticulum-Golgi intermediate compartment IBA
 cellular_componentGO:0005794 Golgi apparatus IEA
 cellular_componentGO:0016020 membrane IEA
 cellular_componentGO:0016021 integral component of membrane IEA
 cellular_componentGO:0030134 COPII-coated ER to Golgi transport vesicle IBA
 cellular_componentGO:0030173 integral component of Golgi membrane IBA
 molecular_functionGO:0003674 molecular_function ND


Pathways (from Reactome)
Pathway description
No match


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
No match
  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

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