ENSDARG00000019877


Danio rerio

Features
Gene ID: ENSDARG00000019877
  
Biological name :rbks
  
Synonyms : rbks / ribokinase
  
Possible biological names infered from orthology : Q8R1Q9 / Q9H477
  
Species: Danio rerio
  
Chr. number: 17
Strand: -1
Band:
Gene start: 40999835
Gene end: 41081806
  
Corresponding Affymetrix probe sets:
  
Cross references: Ensembl peptide - ENSDARP00000030612
NCBI entrez gene - 415207     See in Manteia.
RefSeq - NM_001002117
RefSeq Peptide - NP_001002117
swissprot - F1RCK7
ZFIN ID - ZDB-GENE-040625-112
Ensembl - ENSDARG00000019877
  
See expression report in BioGPS
See gene description in Wikigenes
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 RBKSENSGALG00000010043Gallus gallus
 RBKSENSG00000171174Homo sapiens
 RbksENSMUSG00000029136Mus musculus


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
No match


Protein motifs (from Interpro)
Interpro ID Name
 IPR002139  Ribokinase/fructokinase
 IPR002173  Carbohydrate/puine kinase, PfkB, conserved site
 IPR011611  Carbohydrate kinase PfkB
 IPR011877  Ribokinase
 IPR029056  Ribokinase-like


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0005975 carbohydrate metabolic process IEA
 biological_processGO:0006014 D-ribose metabolic process IEA
 biological_processGO:0016310 phosphorylation IEA
 biological_processGO:0019303 D-ribose catabolic process IEA
 biological_processGO:0046835 carbohydrate phosphorylation IEA
 cellular_componentGO:0005634 nucleus IEA
 cellular_componentGO:0005737 cytoplasm IEA
 molecular_functionGO:0000166 nucleotide binding IEA
 molecular_functionGO:0004747 ribokinase activity IEA
 molecular_functionGO:0005524 ATP binding IEA
 molecular_functionGO:0016301 kinase activity IEA
 molecular_functionGO:0016740 transferase activity IEA
 molecular_functionGO:0016773 phosphotransferase activity, alcohol group as acceptor IEA
 molecular_functionGO:0019200 carbohydrate kinase activity IBA
 molecular_functionGO:0046872 metal ion binding IEA


Pathways (from Reactome)
Pathway description
Pentose phosphate pathway


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
No match
  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

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