ENSDARG00000020085


Danio rerio

Features
Gene ID: ENSDARG00000020085
  
Biological name :slc33a1
  
Synonyms : slc33a1 / solute carrier family 33 (acetyl-CoA transporter), member 1
  
Possible biological names infered from orthology : AC104472.3 / O00400 / Q99J27 / solute carrier family 33 member 1
  
Species: Danio rerio
  
Chr. number: 18
Strand: -1
Band:
Gene start: 34158178
Gene end: 34171280
  
Corresponding Affymetrix probe sets:
  
Cross references: Ensembl peptide - ENSDARP00000108504
Ensembl peptide - ENSDARP00000011566
NCBI entrez gene - 394083     See in Manteia.
RefSeq - NM_201108
RefSeq Peptide - NP_957402
swissprot - B8JLW5
ZFIN ID - ZDB-GENE-040426-1241
Ensembl - ENSDARG00000020085
  
See expression report in BioGPS
See gene description in Wikigenes
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 ENSGALG00000010302Gallus gallus
 AC104472.3ENSG00000284952Homo sapiens
 O00400ENSG00000169359Homo sapiens
 Q99J27ENSMUSG00000027822Mus musculus


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
No match


Protein motifs (from Interpro)
Interpro ID Name
 IPR020846  Major facilitator superfamily domain
 IPR024371  Acetyl-coenzyme A transporter 1


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0015876 acetyl-CoA transport IEA
 biological_processGO:0021955 central nervous system neuron axonogenesis IMP
 biological_processGO:0030514 negative regulation of BMP signaling pathway IMP
 biological_processGO:1902600 proton transmembrane transport IEA
 cellular_componentGO:0005887 integral component of plasma membrane IBA
 cellular_componentGO:0016020 membrane IEA
 cellular_componentGO:0016021 integral component of membrane IEA
 molecular_functionGO:0008521 acetyl-CoA transmembrane transporter activity IEA
 molecular_functionGO:0015295 solute:proton symporter activity IBA


Pathways (from Reactome)
Pathway description
Transport of vitamins, nucleosides, and related molecules


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
 ZFA:0000075 spinal cord spinal cord motor neuron disorganized , abnormal
spinal cord motor neuron decreased amount , abnormal
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 ZFA:0001058 caudal fin caudal fin curved , abnormal
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 ZFA:0001117 post-vent region post-vent region deformed , abnormal
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 ZFA:0005662 spinal nerve spinal nerve axon decreased length , abnormal
spinal nerve axon increased branchiness , abnormal
Show

 ZFA:0009052 motor neuron motor neuron axon decreased length , abnormal
motor neuron axon increased branchiness , abnormal
Show

  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

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