ENSDARG00000020228


Danio rerio

Features
Gene ID: ENSDARG00000020228
  
Biological name :usf2
  
Synonyms : upstream transcription factor 2, c-fos interacting / usf2
  
Possible biological names infered from orthology : Q15853 / Q64705 / upstream transcription factor 2
  
Species: Danio rerio
  
Chr. number: 19
Strand: 1
Band:
Gene start: 10558535
Gene end: 10577420
  
Corresponding Affymetrix probe sets: Dr.18812.1.S1_at (Zebrafish Array)   Dr.4739.1.A1_at (Zebrafish Array)   
  
Cross references: Ensembl peptide - ENSDARP00000125819
Ensembl peptide - ENSDARP00000126091
Ensembl peptide - ENSDARP00000116833
NCBI entrez gene - 567297     See in Manteia.
RefSeq - NM_001122785
RefSeq Peptide - NP_001116257
swissprot - I3IT37
swissprot - I3ISE4
swissprot - Q1L959
ZFIN ID - ZDB-GENE-030131-8475
Ensembl - ENSDARG00000020228
  
See expression report in BioGPS
See gene description in Wikigenes
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 USF2ENSG00000105698Homo sapiens
 Usf2ENSMUSG00000058239Mus musculus


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
usf1 / upstream transcription factor 1 / P22415* / Q61069*ENSDARG0000004168940
usf1l / upstream transcription factor 1, like / USF1* / P22415* / Q61069* / upstream transcription factor 1*ENSDARG0000001446332


Protein motifs (from Interpro)
Interpro ID Name
 IPR011598  Myc-type, basic helix-loop-helix (bHLH) domain


Gene Ontology (GO)
TypeGO IDTermEv.Code
 molecular_functionGO:0046983 protein dimerization activity IEA


Pathways (from Reactome)
Pathway description
Estrogen-dependent gene expression


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
No match
  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

0 s.

 
External programs and data are copyrighted by and are the property of their respective authors.
The Manteia system, data and analyses are provided "as is" with no warranties, expressed or implied as to capabilities or accuracy. User assumes the entire risk as to the results and performance of the software, data and documentation


                   

© Olivier Tassy / Olivier Pourquie 2007-2025
contact: otassy@igbmc.fr