ENSDARG00000020482


Danio rerio

Features
Gene ID: ENSDARG00000020482
  
Biological name :nono
  
Synonyms : nono / non-POU domain containing, octamer-binding
  
Possible biological names infered from orthology : non-POU-domain-containing, octamer binding protein / Q15233 / Q99K48
  
Species: Danio rerio
  
Chr. number: 5
Strand: -1
Band:
Gene start: 22590326
Gene end: 22602979
  
Corresponding Affymetrix probe sets: Dr.20957.1.S1_a_at (Zebrafish Array)   
  
Cross references: Ensembl peptide - ENSDARP00000114380
Ensembl peptide - ENSDARP00000014106
Ensembl peptide - ENSDARP00000143833
NCBI entrez gene - 321994     See in Manteia.
swissprot - A2BGU3
swissprot - Q802Z5
ZFIN ID - ZDB-GENE-030131-713
Ensembl - ENSDARG00000020482
  
See expression report in BioGPS
See gene description in Wikigenes
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 NONOENSGALG00000005507Gallus gallus
 NONOENSG00000147140Homo sapiens
 NonoENSMUSG00000031311Mus musculus


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
pspc1 / Q1JPY8 / paraspeckle component 1 / Q8R326* / Q8WXF1*ENSDARG0000000662159
sfpq / splicing factor proline/glutamine-rich / P23246* / Q8VIJ6* / splicing factor proline and glutamine rich*ENSDARG0000001156457


Protein motifs (from Interpro)
Interpro ID Name
 IPR000504  RNA recognition motif domain
 IPR012975  NOPS
 IPR034552  p54nrb, RNA recognition motif 1
 IPR034558  p54nrb, RNA recognition motif 2


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0000398 mRNA splicing, via spliceosome IBA
 biological_processGO:0006355 regulation of transcription, DNA-templated IBA
 biological_processGO:0007417 central nervous system development IMP
 biological_processGO:0061053 somite development IMP
 biological_processGO:0071599 otic vesicle development IMP
 cellular_componentGO:0005634 nucleus IBA
 molecular_functionGO:0000976 transcription regulatory region sequence-specific DNA binding IBA
 molecular_functionGO:0003676 nucleic acid binding IEA
 molecular_functionGO:0003723 RNA binding IEA


Pathways (from Reactome)
Pathway description
No match


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
 ZFA:0000008 brain brain decreased size , abnormal
Show

 ZFA:0000012 central nervous system central nervous system decreased size , abnormal
Show

 ZFA:0000051 otic vesicle otic vesicle decreased size , abnormal
Show

 ZFA:0000054 pericardium pericardium decreased size , abnormal
Show

 ZFA:0000107 eye eye decreased size , abnormal
Show

 ZFA:0000155 somite somite morphology , abnormal
somite absent , abnormal
Show

 ZFA:0001094 whole organism whole organism morphology , abnormal
whole organism apoptotic , abnormal
Show

 ZFA:0001114 head head decreased size , abnormal
Show

 ZFA:0001115 trunk trunk decreased length , abnormal
trunk increased thickness , abnormal
Show

  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

0 s.

 
External programs and data are copyrighted by and are the property of their respective authors.
The Manteia system, data and analyses are provided "as is" with no warranties, expressed or implied as to capabilities or accuracy. User assumes the entire risk as to the results and performance of the software, data and documentation


                   

© Olivier Tassy / Olivier Pourquie 2007-2025
contact: otassy@igbmc.fr