ENSDARG00000020872


Danio rerio

Features
Gene ID: ENSDARG00000020872
  
Biological name :nfat5a
  
Synonyms : nfat5a / nuclear factor of activated T cells 5a
  
Possible biological names infered from orthology : NFAT5 / nuclear factor of activated T cells 5 / O94916 / Q9WV30
  
Species: Danio rerio
  
Chr. number: 25
Strand: -1
Band:
Gene start: 37094476
Gene end: 37121335
  
Corresponding Affymetrix probe sets:
  
Cross references: Ensembl peptide - ENSDARP00000006495
NCBI entrez gene - 334390     See in Manteia.
RefSeq - NM_199895
RefSeq Peptide - NP_956189
swissprot - F1QXN5
ZFIN ID - ZDB-GENE-030131-6322
Ensembl - ENSDARG00000020872
  
See expression report in BioGPS
See gene description in Wikigenes
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 NFAT5ENSGALG00000039300Gallus gallus
 NFAT5ENSG00000102908Homo sapiens
 Nfat5ENSMUSG00000003847Mus musculus


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
nfat5b / nuclear factor of activated T cells 5b / NFAT5* / Q9WV30* / O94916* / nuclear factor of activated T cells 5*ENSDARG0000010255648
nfatc3a / nuclear factor of activated T cells 3a / Q12968* / NFATC3* / nuclear factor of activated T cells 3* / nuclear factor of activated T cells, cytoplasmic, calcineurin dependent 3*ENSDARG0000007629714
nfatc1 / nuclear factor of activated T cells 1 / O95644* / nuclear factor of activated T cells, cytoplasmic, calcineurin dependent 1*ENSDARG0000003616813
nfatc2a / nuclear factor of activated T cells 2a / NFATC2* / Q13469* / Q60591* / nuclear factor of activated T cells 2* / nuclear factor of activated T cells, cytoplasmic, calcineurin dependent 2*ENSDARG0000010092713
nfatc3b / nuclear factor of activated T cells 3bENSDARG0000005172912
nfatc4 / nuclear factor of activated T cells 4 / Q14934* / Q8K120* / Nuclear factor of activated T-cells, cytoplasmic 4 *ENSDARG0000005416211
nfatc2b / nuclear factor of activated T cells 2b / NFATC2* / Q13469* / nuclear factor of activated T cells 2*ENSDARG0000007997211


Protein motifs (from Interpro)
Interpro ID Name
 IPR002909  IPT domain
 IPR008366  Nuclear factor of activated T cells (NFAT)
 IPR008967  p53-like transcription factor, DNA-binding
 IPR011539  Rel homology domain (RHD), DNA-binding domain
 IPR013783  Immunoglobulin-like fold
 IPR014756  Immunoglobulin E-set
 IPR015646  Nuclear factor of activated T-cells 5
 IPR032397  Rel homology dimerisation domain


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0006355 regulation of transcription, DNA-templated IEA
 biological_processGO:0006366 transcription by RNA polymerase II IEA
 biological_processGO:0007507 heart development IMP
 molecular_functionGO:0000978 RNA polymerase II proximal promoter sequence-specific DNA binding IEA
 molecular_functionGO:0003677 DNA binding IEA
 molecular_functionGO:0003700 DNA-binding transcription factor activity IEA


Pathways (from Reactome)
Pathway description
No match


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
 ZFA:0000009 cardiac ventricle cardiac ventricle decreased thickness , abnormal
cardiac ventricle non-contractile , abnormal
Show

 ZFA:0000054 pericardium pericardium edematous , abnormal
Show

 ZFA:0001094 whole organism whole organism decreased amount , abnormal
Show

  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

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