ENSDARG00000021048


Danio rerio
cleftlippalatetransmembraneproteinmembraneclptm1l-likeapoptoticprocessintegralcomponentmolecularfunction

Features
Gene ID: ENSDARG00000021048
  
Biological name :clptm1l
  
Synonyms : clptm1l / CLPTM1-like / Q6DHU1
  
Possible biological names infered from orthology : Cleft lip and palate transmembrane protein 1-like protein / Q8BXA5 / Q96KA5
  
Species: Danio rerio
  
Chr. number: 19
Strand: -1
Band:
Gene start: 1856250
Gene end: 1871415
  
Corresponding Affymetrix probe sets: Dr.7344.1.A1_at (Zebrafish Array)   Dr.7344.2.A1_at (Zebrafish Array)   Dr.7344.2.A1_a_at (Zebrafish Array)   NM_001002380_at (Zebrafish Genome Array with custom cdf files)   
  
Cross references: Ensembl peptide - ENSDARP00000008246
NCBI entrez gene - 436653     See in Manteia.
RefSeq - NM_001002380
RefSeq Peptide - NP_001002380
swissprot - Q6DHU1
ZFIN ID - ZDB-GENE-040718-75
Ensembl - ENSDARG00000021048
  
See expression report in BioGPS
See gene description in Wikigenes
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 CLPTM1LENSGALG00000013187Gallus gallus
 Q96KA5ENSG00000049656Homo sapiens
 Q8BXA5ENSMUSG00000021610Mus musculus


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
clptm1 / cleft lip and palate associated transmembrane protein 1 / O96005* / Q8VBZ3* / CLPTM1, transmembrane protein* / Cleft lip and palate transmembrane *ENSDARG0000001897334


Protein motifs (from Interpro)
Interpro ID Name
 IPR008429  Cleft lip and palate transmembrane 1
 IPR030434  Cleft lip and palate transmembrane protein 1-like protein


Gene Ontology (GO)
cell deathcell deathcell deathcell deathcell deathcell deathcell deathcell deathcell deathcell deathcell deathcell death
membranemembranemembranemembranemembranemembranemembranemembranemembranemembranemembranemembrane
TypeGO IDTermEv.Code
 biological_processGO:0006915 apoptotic process IEA
 cellular_componentGO:0016020 membrane IEA
 cellular_componentGO:0016021 integral component of membrane IBA
 molecular_functionGO:0003674 molecular_function ND


Pathways (from Reactome)
Pathway description
No match


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
No match
  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

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