ENSDARG00000021343


Danio rerio

Features
Gene ID: ENSDARG00000021343
  
Biological name :wsb1
  
Synonyms : Q7T2F6 / WD repeat and SOCS box containing 1 / wsb1
  
Possible biological names infered from orthology : O54927 / Q9Y6I7
  
Species: Danio rerio
  
Chr. number: 15
Strand: -1
Band:
Gene start: 31161783
Gene end: 31177324
  
Corresponding Affymetrix probe sets: Dr.4305.1.A1_at (Zebrafish Array)   NM_199633_at (Zebrafish Genome Array with custom cdf files)   
  
Cross references: Ensembl peptide - ENSDARP00000005989
NCBI entrez gene - 323226     See in Manteia.
RefSeq - NM_199633
RefSeq Peptide - NP_955927
swissprot - Q7T2F6
ZFIN ID - ZDB-GENE-030131-1946
Ensembl - ENSDARG00000021343
  
See expression report in BioGPS
See gene description in Wikigenes
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 WSB1ENSGALG00000005668Gallus gallus
 WSB1ENSG00000109046Homo sapiens
 Wsb1ENSMUSG00000017677Mus musculus


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
wsb2 / WD repeat and SOCS box containing 2 / O54929* / Q9NYS7*ENSDARG0000005860834
ciao1 / Q6P0D9 / cytosolic iron-sulfur assembly component 1 / O76071* / Q99KN2* / Probable cytosolic iron-sulfur protein assembly protein CIAO1 *ENSDARG0000005921217


Protein motifs (from Interpro)
Interpro ID Name
 IPR001496  SOCS box domain
 IPR001680  WD40 repeat
 IPR011045  Nitrous oxide reductase, N-terminal
 IPR015943  WD40/YVTN repeat-like-containing domain superfamily
 IPR017986  WD40-repeat-containing domain
 IPR019775  WD40 repeat, conserved site
 IPR020472  G-protein beta WD-40 repeat


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0016567 protein ubiquitination IEA
 biological_processGO:0035556 intracellular signal transduction IEA
 cellular_componentGO:0005622 intracellular IEA


Pathways (from Reactome)
Pathway description
Neddylation
Antigen processing: Ubiquitination & Proteasome degradation


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
No match
  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

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