ENSDARG00000021607


Danio rerio

Features
Gene ID: ENSDARG00000021607
  
Biological name :negr1
  
Synonyms : negr1 / neuronal growth regulator 1
  
Possible biological names infered from orthology : Q7Z3B1 / Q80Z24
  
Species: Danio rerio
  
Chr. number: 6
Strand: 1
Band:
Gene start: 36942966
Gene end: 37164417
  
Corresponding Affymetrix probe sets: DrAffx.1.18.S1_at (Zebrafish Array)   NM_001003851_at (Zebrafish Genome Array with custom cdf files)   
  
Cross references: Ensembl peptide - ENSDARP00000038588
NCBI entrez gene - 445374     See in Manteia.
RefSeq - NM_001003851
RefSeq Peptide - NP_001003851
swissprot - A0A4W4
ZFIN ID - ZDB-GENE-040822-27
Ensembl - ENSDARG00000021607
  
See expression report in BioGPS
See gene description in Wikigenes
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 NEGR1ENSGALG00000011350Gallus gallus
 NEGR1ENSG00000172260Homo sapiens
 Negr1ENSMUSG00000040037Mus musculus


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
ntm / neurotriminENSDARG0000001806541
opcml / opioid binding protein/cell adhesion molecule-like / NTM* / Q14982* / Q99PJ0* / Q9P121* / neurotrimin* / Mus musculus neurotrimin (Ntm), transcript variant 7, mRNA.*ENSDARG0000001300540
IGLON5 / zgc:110372 / A6NGN9* / Q8HW98* / IgLON family member 5*ENSDARG0000002217635
LSAMP / limbic system-associated membrane protein / Q13449*ENSDARG0000010306924


Protein motifs (from Interpro)
Interpro ID Name
 IPR003598  Immunoglobulin subtype 2
 IPR003599  Immunoglobulin subtype
 IPR007110  Immunoglobulin-like domain
 IPR013098  Immunoglobulin I-set
 IPR013106  Immunoglobulin V-set domain
 IPR013783  Immunoglobulin-like fold


Gene Ontology (GO)
TypeGO IDTermEv.Code
 molecular_functionGO:0005515 protein binding IPI
 molecular_functionGO:0042802 identical protein binding IDA


Pathways (from Reactome)
Pathway description
No match


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
No match
  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

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