ENSDARG00000021787


Danio rerio

Features
Gene ID: ENSDARG00000021787
  
Biological name :abcb5
  
Synonyms : abcb5 / ATP-binding cassette, sub-family B (MDR/TAP), member 5
  
Possible biological names infered from orthology :
  
Species: Danio rerio
  
Chr. number: 16
Strand: -1
Band:
Gene start: 19537038
Gene end: 19568795
  
Corresponding Affymetrix probe sets: Dr.18397.1.A1_at (Zebrafish Array)   Dr.8645.1.A1_at (Zebrafish Array)   
  
Cross references: Ensembl peptide - ENSDARP00000121883
Ensembl peptide - ENSDARP00000151689
NCBI entrez gene - 798527     See in Manteia.
RefSeq - XM_001922682
swissprot - F1R7A8
ZFIN ID - ZDB-GENE-030131-6414
Ensembl - ENSDARG00000021787
  
See expression report in BioGPS
See gene description in Wikigenes
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 ENSGALG00000010901Gallus gallus


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
abcb4 / ATP-binding cassette, sub-family B (MDR/TAP), member 4 / ABCB1* / P08183* / Abcb1b* / P21447* / P21440* / Abcb1a* / P21439* / P06795* / Multidrug resistance protein 1A * / Phosphati...ENSDARG0000001093653
abcb11a / ATP-binding cassette, sub-family B (MDR/TAP), member 11aENSDARG0000001157348
abcb11b / ATP-binding cassette, sub-family B (MDR/TAP), member 11b / ABCB11* / O95342* / Q9QY30* / ATP binding cassette subfamily B member 11* / ATP-binding cassette, sub-family B (MDR/TAP)...ENSDARG0000007007847


Protein motifs (from Interpro)
Interpro ID Name
 IPR003439  ABC transporter-like
 IPR003593  AAA+ ATPase domain
 IPR011527  ABC transporter type 1, transmembrane domain
 IPR017871  ABC transporter, conserved site
 IPR027417  P-loop containing nucleoside triphosphate hydrolase


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0050787 detoxification of mercury ion IDA
 biological_processGO:0055085 transmembrane transport IEA
 cellular_componentGO:0016020 membrane IEA
 cellular_componentGO:0016021 integral component of membrane IEA
 molecular_functionGO:0000166 nucleotide binding IEA
 molecular_functionGO:0005524 ATP binding IEA
 molecular_functionGO:0016887 ATPase activity IEA
 molecular_functionGO:0042626 ATPase activity, coupled to transmembrane movement of substances IEA


Pathways (from Reactome)
Pathway description
No match


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
No match
  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

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