ENSDARG00000023237


Danio rerio

Features
Gene ID: ENSDARG00000023237
  
Biological name :syne3
  
Synonyms : spectrin repeat containing, nuclear envelope family member 3 / syne3
  
Possible biological names infered from orthology : Nesprin-3 / Q4FZC9 / Q6ZMZ3
  
Species: Danio rerio
  
Chr. number: 17
Strand: 1
Band:
Gene start: 15899039
Gene end: 15966746
  
Corresponding Affymetrix probe sets:
  
Cross references: Ensembl peptide - ENSDARP00000129264
NCBI entrez gene - 100009645     See in Manteia.
swissprot - X1WGA9
ZFIN ID - ZDB-GENE-070209-271
Ensembl - ENSDARG00000023237
  
See expression report in BioGPS
See gene description in Wikigenes
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 SYNE3ENSGALG00000011076Gallus gallus
 SYNE3ENSG00000176438Homo sapiens
 Syne3ENSMUSG00000054150Mus musculus


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
No match


Protein motifs (from Interpro)
Interpro ID Name
 IPR002017  Spectrin repeat
 IPR012315  KASH domain
 IPR018159  Spectrin/alpha-actinin
 IPR030267  Nesprin-3


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0090286 cytoskeletal anchoring at nuclear membrane IEA
 cellular_componentGO:0005640 nuclear outer membrane IEA
 cellular_componentGO:0016020 membrane IEA
 cellular_componentGO:0016021 integral component of membrane IEA
 cellular_componentGO:0045111 intermediate filament cytoskeleton IMP
 molecular_functionGO:0008092 cytoskeletal protein binding IEA


Pathways (from Reactome)
Pathway description
No match


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
 ZFA:0009183 epidermal cell epidermal cell keratin filament spatial pattern , abnormal
Show

  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

0 s.

 
External programs and data are copyrighted by and are the property of their respective authors.
The Manteia system, data and analyses are provided "as is" with no warranties, expressed or implied as to capabilities or accuracy. User assumes the entire risk as to the results and performance of the software, data and documentation


                   

© Olivier Tassy / Olivier Pourquie 2007-2025
contact: otassy@igbmc.fr