ENSDARG00000024047


Danio rerio

Features
Gene ID: ENSDARG00000024047
  
Biological name :tmem38a
  
Synonyms : Q6P2T0 / tmem38a / transmembrane protein 38A
  
Possible biological names infered from orthology : Q3TMP8 / Q9H6F2
  
Species: Danio rerio
  
Chr. number: 11
Strand: 1
Band:
Gene start: 7158723
Gene end: 7179516
  
Corresponding Affymetrix probe sets: Dr.3983.1.A1_at (Zebrafish Array)   NM_200900_at (Zebrafish Genome Array with custom cdf files)   
  
Cross references: Ensembl peptide - ENSDARP00000037150
NCBI entrez gene - 393874     See in Manteia.
RefSeq - NM_200900
RefSeq Peptide - NP_957194
swissprot - Q6P2T0
ZFIN ID - ZDB-GENE-040426-1888
Ensembl - ENSDARG00000024047
  
See expression report in BioGPS
See gene description in Wikigenes
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 TMEM38AENSGALG00000003778Gallus gallus
 Q9H6F2ENSG00000072954Homo sapiens
 Q3TMP8ENSMUSG00000031791Mus musculus


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
TMEM38B / transmembrane protein 38B / Q9NVV0*ENSDARG0000010054938


Protein motifs (from Interpro)
Interpro ID Name
 IPR007866  TRIC channel


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0006811 ion transport IEA
 biological_processGO:0006813 potassium ion transport IEA
 biological_processGO:0015672 monovalent inorganic cation transport IEA
 biological_processGO:0071805 potassium ion transmembrane transport IEA
 cellular_componentGO:0005634 nucleus IEA
 cellular_componentGO:0016020 membrane IEA
 cellular_componentGO:0016021 integral component of membrane IEA
 cellular_componentGO:0016529 sarcoplasmic reticulum IEA
 cellular_componentGO:0031965 nuclear membrane IEA
 cellular_componentGO:0033017 sarcoplasmic reticulum membrane IEA
 molecular_functionGO:0005261 cation channel activity IEA
 molecular_functionGO:0005267 potassium channel activity IEA
 molecular_functionGO:0015269 calcium-activated potassium channel activity IBA


Pathways (from Reactome)
Pathway description
No match


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
No match
  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

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