ENSDARG00000024277


Danio rerio

Features
Gene ID: ENSDARG00000024277
  
Biological name :pigm
  
Synonyms : phosphatidylinositol glycan anchor biosynthesis, class M / pigm / Q7T310
  
Possible biological names infered from orthology : GPI mannosyltransferase 1 / Q8C2R7 / Q9H3S5
  
Species: Danio rerio
  
Chr. number: 24
Strand: -1
Band:
Gene start: 42102204
Gene end: 42108655
  
Corresponding Affymetrix probe sets: Dr.25773.1.S1_at (Zebrafish Array)   NM_200390_at (Zebrafish Genome Array with custom cdf files)   
  
Cross references: Ensembl peptide - ENSDARP00000036819
NCBI entrez gene - 393361     See in Manteia.
RefSeq - NM_200390
RefSeq Peptide - NP_956684
swissprot - Q7T310
ZFIN ID - ZDB-GENE-040426-1393
Ensembl - ENSDARG00000024277
  
See expression report in BioGPS
See gene description in Wikigenes
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 PIGMENSGALG00000010768Gallus gallus
 PIGMENSG00000143315Homo sapiens
 PigmENSMUSG00000050229Mus musculus


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
No match


Protein motifs (from Interpro)
Interpro ID Name
 IPR007704  Mannosyltransferase, DXD


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0006506 GPI anchor biosynthetic process IEA
 cellular_componentGO:0005783 endoplasmic reticulum IEA
 cellular_componentGO:0005789 endoplasmic reticulum membrane IEA
 cellular_componentGO:0016020 membrane IEA
 cellular_componentGO:0016021 integral component of membrane IEA
 molecular_functionGO:0016740 transferase activity IEA
 molecular_functionGO:0016757 transferase activity, transferring glycosyl groups IEA
 molecular_functionGO:0016758 transferase activity, transferring hexosyl groups IEA


Pathways (from Reactome)
Pathway description
Synthesis of glycosylphosphatidylinositol (GPI)


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
No match
  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
 ENSDARG00000063559 pigx / phosphatidylinositol glycan anchor biosynthesis, class X / Q8TBF5* / Q99LV7* / Phosphatidylinositol-glycan biosynthesis class X protein *  / complex






 

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