ENSDARG00000024564


Danio rerio

Features
Gene ID: ENSDARG00000024564
  
Biological name :sccpdhb
  
Synonyms : saccharopine dehydrogenase b / sccpdhb
  
Possible biological names infered from orthology : Q8NBX0 / Q8R127 / Saccharopine dehydrogenase-like oxidoreductase / saccharopine dehydrogenase (putative) / SCCPDH
  
Species: Danio rerio
  
Chr. number: 20
Strand: -1
Band:
Gene start: 34967410
Gene end: 34985555
  
Corresponding Affymetrix probe sets: Dr.18513.1.A1_at (Zebrafish Array)   Dr.18513.2.S1_at (Zebrafish Array)   Dr.18513.2.S1_a_at (Zebrafish Array)   NM_001005574_at (Zebrafish Genome Array with custom cdf files)   
  
Cross references: Ensembl peptide - ENSDARP00000035945
NCBI entrez gene - 407665     See in Manteia.
RefSeq - NM_001005574
RefSeq Peptide - NP_001005574
swissprot - Q5RHQ4
ZFIN ID - ZDB-GENE-041010-211
Ensembl - ENSDARG00000024564
  
See expression report in BioGPS
See gene description in Wikigenes
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 SCCPDHENSGALG00000010641Gallus gallus
 Q8NBX0ENSG00000143653Homo sapiens
 Q8R127ENSMUSG00000038936Mus musculus


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
zgc:174379 / SCCPDH (1 of many) / Q8R127* / SCCPDH* / Q8NBX0* / saccharopine dehydrogenase (putative)* / Saccharopine dehydrogenase-like oxidoreductase *ENSDARG0000007505366
sccpdha / saccharopine dehydrogenase a / Q8R127* / SCCPDH* / Q8NBX0* / saccharopine dehydrogenase (putative)* / Saccharopine dehydrogenase-like oxidoreductase *ENSDARG0000007576666


Protein motifs (from Interpro)
Interpro ID Name
 IPR005097  Saccharopine dehydrogenase, NADP binding domain
 IPR016040  NAD(P)-binding domain


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0055114 oxidation-reduction process IEA
 cellular_componentGO:0016020 membrane IEA
 cellular_componentGO:0016021 integral component of membrane IEA
 molecular_functionGO:0016491 oxidoreductase activity IEA


Pathways (from Reactome)
Pathway description
Platelet degranulation


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
No match
  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

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