ENSDARG00000025174


Danio rerio

Features
Gene ID: ENSDARG00000025174
  
Biological name :zgc:103482
  
Synonyms : zgc:103482
  
Possible biological names infered from orthology : HABP4 / hyaluronan binding protein 4 / Q5JVS0
  
Species: Danio rerio
  
Chr. number: 21
Strand: 1
Band:
Gene start: 20396858
Gene end: 20402686
  
Corresponding Affymetrix probe sets: Dr.11543.1.A1_at (Zebrafish Array)   
  
Cross references: Ensembl peptide - ENSDARP00000007173
Ensembl peptide - ENSDARP00000120521
NCBI entrez gene - 450001     See in Manteia.
RefSeq - XM_005161172
swissprot - B0R085
swissprot - A0A0J9YIY7
ZFIN ID - ZDB-GENE-041010-115
Ensembl - ENSDARG00000025174
  
See expression report in BioGPS
See gene description in Wikigenes
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 HABP4ENSGALG00000012628Gallus gallus
 HABP4ENSG00000130956Homo sapiens
 Habp4ENSMUSG00000021476Mus musculus


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
serbp1a / SERPINE1 mRNA binding protein 1a / Q9CY58* / SERBP1* / Q8NC51* / SERPINE1 mRNA binding protein 1* / Plasminogen activator inhibitor 1 RNA-binding protein *ENSDARG0000007424246
serbp1b / SERPINE1 mRNA binding protein 1b / Q8NC51* / SERBP1* / SERPINE1 mRNA binding protein 1*ENSDARG0000008742146


Protein motifs (from Interpro)
Interpro ID Name
 IPR006861  Hyaluronan/mRNA-binding protein
 IPR032381  Intracellular hyaluronan-binding protein 4, N-terminal domain


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0008150 biological_process ND
 cellular_componentGO:0005575 cellular_component ND
 molecular_functionGO:0003730 mRNA 3"-UTR binding IEA


Pathways (from Reactome)
Pathway description
Platelet degranulation


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
No match
  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

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