ENSDARG00000026655


Danio rerio

Features
Gene ID: ENSDARG00000026655
  
Biological name :tspo
  
Synonyms : translocator protein / tspo
  
Possible biological names infered from orthology : Q5TGU0 / Q9CRZ8 / translocator protein 2 / TSPO2
  
Species: Danio rerio
  
Chr. number: 6
Strand: -1
Band:
Gene start: 40578219
Gene end: 40583253
  
Corresponding Affymetrix probe sets: Dr.20778.1.S1_at (Zebrafish Array)   NM_001006032_at (Zebrafish Genome Array with custom cdf files)   
  
Cross references: Ensembl peptide - ENSDARP00000037745
Ensembl peptide - ENSDARP00000157052
NCBI entrez gene - 450011     See in Manteia.
RefSeq - NM_001006032
RefSeq Peptide - NP_001006032
swissprot - Q5XJB6
ZFIN ID - ZDB-GENE-041010-125
Ensembl - ENSDARG00000026655
  
See expression report in BioGPS
See gene description in Wikigenes
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 TSPO2ENSGALG00000003212Gallus gallus
 TSPO2ENSG00000112212Homo sapiens
 Tspo2ENSMUSG00000023995Mus musculus


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
No match


Protein motifs (from Interpro)
Interpro ID Name
 IPR004307  TspO/MBR-related protein
 IPR030164  Translocator protein


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0060319 primitive erythrocyte differentiation IMP
 cellular_componentGO:0016020 membrane IEA
 cellular_componentGO:0016021 integral component of membrane IEA
 molecular_functionGO:0003674 molecular_function ND


Pathways (from Reactome)
Pathway description
No match


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
 ZFA:0009256 nucleate erythrocyte nucleate erythrocyte hemoglobin complex decreased amount , abnormal
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Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

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contact: otassy@igbmc.fr