ENSDARG00000027649
Danio rerio | |
Features
| Gene ID: | ENSDARG00000027649 | | | | | Biological name : | cpsf3 | | | | | Synonyms : | cleavage and polyadenylation specific factor 3 / cpsf3 | | | | | Possible biological names infered from orthology : | Cleavage and polyadenylation specificity factor subunit 3 / Q9QXK7 / Q9UKF6 | | | | | Species: | Danio rerio | | | | | Chr. number: | 20 | | Strand: | -1 | | Band: | | | Gene start: | 29619820 | | Gene end: | 29633507 | | | | | Corresponding Affymetrix probe sets: | Dr.3731.1.A1_at (Zebrafish Array) NM_001003836_at (Zebrafish Genome Array with custom cdf files) | | | | | Cross references: | Ensembl peptide - ENSDARP00000040291
NCBI entrez gene - 324554
See in Manteia.
RefSeq - NM_001003836
RefSeq Peptide - NP_001003836
swissprot - Q5U3T4
ZFIN ID - ZDB-GENE-030131-3275
Ensembl - ENSDARG00000027649
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See expression report in BioGPS
See gene description in Wikigenes
See co-cited genes in PubMed
Ortholog prediction (from Ensembl)
Paralog prediction (from Ensembl)
Protein motifs (from Interpro)
| IPR001279 | Metallo-beta-lactamase | | IPR011108 | Zn-dependent metallo-hydrolase, RNA specificity domain | | IPR021718 | Pre-mRNA 3"-end-processing endonuclease polyadenylation factor C-term | | IPR022712 | Beta-Casp domain |
Gene Ontology (GO)
No match
Pathways (from Reactome)
Phenotype (from MGI, Zfin or HPO)
| ZFA:0000054 | pericardium | pericardium edematous , abnormal |
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| | ZFA:0000107 | eye | eye decreased size , abnormal |
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| | ZFA:0000112 | gut | gut hypoplastic , abnormal
gut quality , abnormal |
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| | ZFA:0000114 | heart | heart quality , abnormal |
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| | ZFA:0000123 | liver | liver hypoplastic , abnormal
liver quality , abnormal |
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| | ZFA:0001114 | head | head decreased size , abnormal |
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Interacting proteins (from Reactome)
No match
0 s.
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