ENSDARG00000027916


Danio rerio

Features
Gene ID: ENSDARG00000027916
  
Biological name :fntb
  
Synonyms : farnesyltransferase, CAAX box, beta / fntb
  
Possible biological names infered from orthology : CHURC1-FNTB / CHURC1-FNTB readthrough / P49356 / Protein farnesyltransferase subunit beta / Q8K2I1
  
Species: Danio rerio
  
Chr. number: 20
Strand: 1
Band:
Gene start: 28803642
Gene end: 28827760
  
Corresponding Affymetrix probe sets: Dr.3093.1.A1_at (Zebrafish Array)   
  
Cross references: Ensembl peptide - ENSDARP00000034563
Ensembl peptide - ENSDARP00000127398
Ensembl peptide - ENSDARP00000150616
NCBI entrez gene - 323500     See in Manteia.
RefSeq - NM_001002128
RefSeq Peptide - NP_001002128
swissprot - Q6IQG3
swissprot - U3JAX7
ZFIN ID - ZDB-GENE-030131-2220
Ensembl - ENSDARG00000027916
  
See expression report in BioGPS
See gene description in Wikigenes
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 ENSGALG00000038143Gallus gallus
 CHURC1-FNTBENSG00000125954Homo sapiens
 FNTBENSG00000257365Homo sapiens
 FntbENSMUSG00000033373Mus musculus


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
No match


Protein motifs (from Interpro)
Interpro ID Name
 IPR001330  PFTB repeat
 IPR008930  Terpenoid cyclases/protein prenyltransferase alpha-alpha toroid
 IPR026872  Protein farnesyltransferase subunit beta


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0003231 cardiac ventricle development IMP
 biological_processGO:0018343 protein farnesylation IEA
 biological_processGO:0042127 regulation of cell proliferation IEA
 cellular_componentGO:0005965 protein farnesyltransferase complex IEA
 molecular_functionGO:0003824 catalytic activity IEA
 molecular_functionGO:0004660 protein farnesyltransferase activity IBA
 molecular_functionGO:0016740 transferase activity IEA


Pathways (from Reactome)
Pathway description
Inactivation, recovery and regulation of the phototransduction cascade


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
 ZFA:0000009 cardiac ventricle cardiac ventricle decreased size , abnormal
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 ZFA:0000206 facial nerve motor nucleus facial nerve motor nucleus mislocalised anteriorly , abnormal
Show

 ZFA:0001094 whole organism whole organism decreased size , abnormal
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Interacting proteins (from Reactome)
Interactor ID Name Interaction type
 ENSDARG00000035798 gngt1 / guanine nucleotide binding protein (G protein), gamma transducing activity polypeptide 1 / GNG11* / Q61012* / P61952* / P61953* / P63211* / G protein subunit gamma 11* / G protein s...  / reaction
 ENSDARG00000099143 fnta / farnesyltransferase, CAAX box, alpha / P49354* / Q61239* / Protein farnesyltransferase/geranylgeranyltransferase type-1 subunit alpha *  / complex






 

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